Gene BamMC406_6616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_6616 
Symbol 
ID6181815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010553 
Strand
Start bp106749 
End bp108068 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content64% 
IMG OID641685376 
Producthypothetical protein 
Protein accessionYP_001812281 
Protein GI172064631 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.266008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAGTG ACGTAATCGC ACTGTTTGCC GTGGACAGGC CCGTCGCGGT CGACGTCGAC 
AGCGAATTCA CCGTGCTATC AGTCGTACTC AGGCCGGTCG ACAGCGAACC AATCGAGCTC
GTGGCCGTCG ACAGGCCGGT CGACAGCGAA CCGATCGAGC TCGTGGCCGA CGACAGCCCC
GTCGACGTCG AGGTCGACAG CGACGCGACC GTGCTATCAG TCGTGCTCAG ACCAGTGGAC
AGCGAACCGA TCGAACTCGT GGCCGACGAC AGACCCGTCG ACGTCGAGGT CGACAGCGAC
GCGACCGTGC TATCGGTCGT GCTCAAACCA GTGGACAGCG AACCGATCGA GCTCGTTGCC
GTGGACAGAC CCGTCGACGT GGACGTCGAC AGCGACGCGA CCGTGCTATC GGTCGTGCTC
AGACCAGTAG ACAGCGAACC GATCGAACTC GTGGCCGACG ACAGACCCGT CGACGTGGAC
GTCGACAGCG ACGCGACCGT GCTATCGGTC GTGCTCAGAC CAGTGGACAG CGAACCGATC
GAGCTCGTGG CCGACGACAG ACCCGTCGAC GTCGAGGTCG ACAGCGACGC GACCGTGCTA
TCAGTCGTGC TCAGACCAGT GGACAGCGAA CCGATCGAAC TCGTCGCCGA CGACAGCCCC
GTCGACGTCG AAGTCGACAG CGACGCGACC GTGCTATCAG TCGTGCTCAG ACCAGTGGAC
AGCGAACCGA TCGAACTCGT CGCCGACGAC AGCCCCGTCG ACGTCGAAGT CGACAGCGAC
GCGACCGTGC TATCGGTCGT GCTCAGACCA GTGGACAGCG AACCGATCGA GCTGGTGGCC
GACGACAGAC CCGTCGACGT CGAGGTCGAC AGCGACGCGA CCGTGCTATC GGTCGTGCTC
AAACCAGTGG ACAGCGAACC GATCGAGCTC GTGGCCGACG ACAGCCCCGT CGACGTCGAG
GTCGACAGCG ACGCGACCGT GCTATCGGTC GTGCTCAAAC CAGTGGACAG CGAACCGATC
GAGCTCGTGG CCGACGACAG ACCCGTCGAC GTCGAGGTCG ACAGCGACGC GACCGTGCTA
TCAGTCGTGC TCAGACCAGT GGACAGCGAA CCGATCGAGC TCGTTGCCGT GGACAGACCC
GTCGACGTCG AGGTCGACAG CGTATCAATC GCCGTATTCG TCGCGTACAG TTGCGAGCCG
TTAATCGCGT CCGTGCTCGA ATCCGTCACC CGCCCGGCCG CTACGTTTGT AATCTGGCGT
TCACTGCCGG CCGCCCCCAC GCTCACCACG CTCGTCGGAT TCGTACCCGC GTACGCATAG
 
Protein sequence
MDSDVIALFA VDRPVAVDVD SEFTVLSVVL RPVDSEPIEL VAVDRPVDSE PIELVADDSP 
VDVEVDSDAT VLSVVLRPVD SEPIELVADD RPVDVEVDSD ATVLSVVLKP VDSEPIELVA
VDRPVDVDVD SDATVLSVVL RPVDSEPIEL VADDRPVDVD VDSDATVLSV VLRPVDSEPI
ELVADDRPVD VEVDSDATVL SVVLRPVDSE PIELVADDSP VDVEVDSDAT VLSVVLRPVD
SEPIELVADD SPVDVEVDSD ATVLSVVLRP VDSEPIELVA DDRPVDVEVD SDATVLSVVL
KPVDSEPIEL VADDSPVDVE VDSDATVLSV VLKPVDSEPI ELVADDRPVD VEVDSDATVL
SVVLRPVDSE PIELVAVDRP VDVEVDSVSI AVFVAYSCEP LIASVLESVT RPAATFVIWR
SLPAAPTLTT LVGFVPAYA