| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_6533 |
|---|
| Symbol | |
|---|
| ID | 6181779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010553 |
|---|
| Strand | + |
|---|
| Start bp | 26669 |
|---|
| End bp | 27895 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641685302 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001812207 |
|---|
| Protein GI | 172064557 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.350446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG TTTCCTTCGC CGGCGTGACC GTGCCGCTCG AGGATGTGCA GGAACAGCCC
GCGAGTTTCG TGCGTCGCCT CGAGCAAGCC AAGATCAATC CCGGGCACGC GCACTGCCTT
TGTCGGGGCC TCGGCTCCCC CCTCCGACTC CAGATCCGCC GGTATGGCAA CTTGCTGCAT
CTCGCCGGCT GGCCCGACGA AGGGCCGTTG CACGACCGAT CGTCGTGCCC ATTCCACAAG
GATCCGTCCG CCGGCGGCGC TGATGGCAGC CAAACCCTGC CCGGTATTGT CGCCACATCG
ATGGGATTGC GTGCGAAGCT CGACGTCGCA TTGACACAGC GCTCGGTCAG CTCGGGATCT
AAAGGAACGC GAAGCGGAAG CTCGACCGGC ACCTCGCGGC GCGCCGCGCC CCTCCTCGGC
TTCCTCCAGA CGCTATGGCA AGTCGCGGGC CTCAATCGTT GGTCGGGCAG CGAGCGCGCA
CGCAACTGGG GCGTGTGCAA TGCACGCATC CTCTCCGGAG TGGGAGACGC GGTTGTGAAC
GGCGAGCCGG CCGATCAGGT GCTCCACGTG ATGCGGCGGT TTCAAGACGC GGACCGCGAC
GCGATCAATG CCGAGCTCGA CGCCTTCCTC TCGCGCGTGG GTCACCGAGA CGGCGCGAAC
CATCGCGGCA TCGTCGTCGG GGAGATCGCG GAGATCGGCA CGACCCCGTA CGGGCGCTCG
ATCACGTTGC GCCAGAGCGC GAGACGCTAT TACGCAAGCA GCTCGCTGGT CGCCCTCGCA
GAAACGAGAT TTGCGCACGC GTGGCGCGCG TTGGGCGACT ACAACGCCAG AGTCGTCACG
ATCCTTGTCA TCGAGCGAAC CCCGAAGGGC CATCACGTGC TGGTGAACCT TGCCGCGATG
CTCTGCTCGG CGAACTACAT CGCCTGCGAC TCCATCCACG AAGTGGCGAT GGCGAATCGT
CTGGTCGCTG AACACCGCGC CTTCGACAAG CCCATCCGGC TGGAAGATGG CGCCGCGATG
CTGCCCGACT TCGTGCTCAC GGACTCCCCG ACGCCGACCC ACGTTGAGGT CTACGGCATG
AACGGACAGC CCGACTACGA AGCGAGGAAG GCGGCCAAGC GCGCGCGGCG ACTGCGCGAC
GGGATCCCGG CCGTCGAATG GAACATCGAG GACCCGCTCT CGTCAGTAAC ACTCCCGCCG
ATCGCGCAAC GCTGCCCGGC CGCCTGA
|
|---|
| Protein sequence | MTDVSFAGVT VPLEDVQEQP ASFVRRLEQA KINPGHAHCL CRGLGSPLRL QIRRYGNLLH
LAGWPDEGPL HDRSSCPFHK DPSAGGADGS QTLPGIVATS MGLRAKLDVA LTQRSVSSGS
KGTRSGSSTG TSRRAAPLLG FLQTLWQVAG LNRWSGSERA RNWGVCNARI LSGVGDAVVN
GEPADQVLHV MRRFQDADRD AINAELDAFL SRVGHRDGAN HRGIVVGEIA EIGTTPYGRS
ITLRQSARRY YASSSLVALA ETRFAHAWRA LGDYNARVVT ILVIERTPKG HHVLVNLAAM
LCSANYIACD SIHEVAMANR LVAEHRAFDK PIRLEDGAAM LPDFVLTDSP TPTHVEVYGM
NGQPDYEARK AAKRARRLRD GIPAVEWNIE DPLSSVTLPP IAQRCPAA
|
|---|
| |