| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5509 |
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| Symbol | |
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| ID | 6179392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2762728 |
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| End bp | 2763708 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641685264 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001812169 |
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| Protein GI | 172064518 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.872831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.058561 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCA CTATTACTAC TACCCGCCCC ACCACCACCA CCGCCACCGC CACCGCGGCG
TCGCTGAGCG ACCTCGTGAT CGAGCGGGTG GGCTTCGGCC TGTTCGTGCT CGACCGCTCG
ATGACCGTGC TGATGTGGAA TCGCTTCATG CAGGACCACA GCGGCATCCC GGCTGCCGAC
GTGATCGGCC GCAACCTGTT CGACTGCTTT CCGGAGCTGC CGCGCACGTG GCTCGAACGC
AAGCTCGAGA GCGTGTTCCA GCTCGGCAGC TTCGCGTTCA GCTCGTGGGA GCAGCGGCCC
TACCTGTTTC GCTTCGAGCA CGACCGGCCG ATCACCGGCG GCGTCGACTA CATGCAGCAG
GACTGCACGT TCATGCCGCT CACGCGCGGC CGCGAAGTCG AGGCCGTCTG CGTGACGATC
TCGGACGTCA CGCACGTGAG CGTGATGCAG CGCGAGCGCG AGGAAGCGGT CGCGAAGCTG
CGCGAGCATG CGAACCGCGA CGGCCTCACC GGCATCGCGA ACCGGCGCTT CTTCGAGGCG
CGGCTCGGCG ACGAGTTCGC GCGCTGGCAG CGCTACGGCG GCGACCTGTC GATGCTGCTG
TTCGACCTCG ACCACTTCAA GACGATCAAC GACCGGTTCG GGCATGCGGC CGGCGATGCG
GTATTGCGCG AGACGGCGCG CCGCGTCGCG TCGATCGTGC GCTCCCAGGA TACGTTCGGC
CGCTTCGGCG GCGAGGAATT CGCGCTGCTG CTGCCGTGCA CGAATCTCGA CGAGGCGATG
CGGGTGGCCG ACAAGGTGCG CGACGCGATC GGCAGCACGC CGGTCGACGC GGAAGGTGTC
AGCGTGCCGG TGACGGCGAG CGTCGGCGGC GCGTGCGCGA CGCCGGGCGT GGCGGCGCCC
GACGTGCTCG TCAACGAGGC CGACACCGCG CTCTATCGCG CGAAGCGCCT CGGGCGCGAC
CGGTCGATCG CGTACGCGTG A
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| Protein sequence | MTATITTTRP TTTTATATAA SLSDLVIERV GFGLFVLDRS MTVLMWNRFM QDHSGIPAAD
VIGRNLFDCF PELPRTWLER KLESVFQLGS FAFSSWEQRP YLFRFEHDRP ITGGVDYMQQ
DCTFMPLTRG REVEAVCVTI SDVTHVSVMQ REREEAVAKL REHANRDGLT GIANRRFFEA
RLGDEFARWQ RYGGDLSMLL FDLDHFKTIN DRFGHAAGDA VLRETARRVA SIVRSQDTFG
RFGGEEFALL LPCTNLDEAM RVADKVRDAI GSTPVDAEGV SVPVTASVGG ACATPGVAAP
DVLVNEADTA LYRAKRLGRD RSIAYA
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