| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5484 |
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| Symbol | |
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| ID | 6180923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2730803 |
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| End bp | 2731840 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641685239 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_001812144 |
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| Protein GI | 172064493 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00238485 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGACAC TCGATGAAGT GGCCCGCCGC GCCGGCGTGA CGGCCGCGAC GGTCTCGAAC
GTGCTGCGCA ATCGCGGCCG GGTTGGCGAA GCCACCCGCG CGCGCGTGCT CGCAGCCGTG
CAGGCGCTCG GGTACCGGCC GCATCTCGCG GCGCGGGCCC TCGCTGAAGG GCGCGCGCCG
ACGGTCGCGC TGATGGTATC GAGCATCGCG AACCCGTTCT ATCCGGAGTT CGCGCTCGCG
GTCGAGCGCG CGGTGCGTCG CAACGGGCAG TTCCTGATCG TCTGCAATAC CAACGAAGAC
CCGTTGCAGG GGCGAGCGTA TCTCGACCAG ATCGCCGGCA CGATCTCCGA AGGCATTCTC
GTGACCAACG CGAACCTGCA CCTGCCGGAT CTGGCGGACG TCGCGCGGCG CGGCGTGCCG
GTCGTGCTGT GTCTGTGGGA GCGGCCCGAT GCGCCGCCCG AAGGGTTGCC GTGCGTGGCG
GTGGATTTCC GCGAAGCGGG GCGGATCGCG ACGCGGCATC TGCTCGAACT CGGGCACCGG
ACGATCGGCG TGATCGTCGG CGGGTCGGCG AGCGGCGTGC AGGCGGCGCG CTACGACGGC
TTCGTCGACG TGATGCGCGA AGCGGGGCTC GACGCGTCGA TCGTCGCGGC CGGGCCCGAT
TCCGATTCGA TCGAAGGTGG CGTGCGCGCG GCGGGCCGGC TGCTCGACGC GCATGCCGGG
CTGACCGCGC TGGTCGCGAC GAACGACCTG CCCGCGATCG GGGCGCTGCA CGCGGCGGCC
GATCGCGGCC GGCGCGTGCC CGACGACCTG TCGATCGTCG GCATTACCGA CATTCATCTG
GCGAGCGACA CGCGGCCAAC GTTGACGACT GTGGCGATCC CGACCGCCGA GGCCGCCGGG
CTCGCGGTCG AACTGCTCAA TGCGCTGCGC GAGGCGGGCG GCCGGATCGA CGATGCGTCG
CGCGTGCGGA TCGCGTCGTT GCCGCGGTTG GTGGTGCGCG GGACGACGGC GGCGGTGTCG
GGGCGACGCT TCATGTAG
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| Protein sequence | MATLDEVARR AGVTAATVSN VLRNRGRVGE ATRARVLAAV QALGYRPHLA ARALAEGRAP
TVALMVSSIA NPFYPEFALA VERAVRRNGQ FLIVCNTNED PLQGRAYLDQ IAGTISEGIL
VTNANLHLPD LADVARRGVP VVLCLWERPD APPEGLPCVA VDFREAGRIA TRHLLELGHR
TIGVIVGGSA SGVQAARYDG FVDVMREAGL DASIVAAGPD SDSIEGGVRA AGRLLDAHAG
LTALVATNDL PAIGALHAAA DRGRRVPDDL SIVGITDIHL ASDTRPTLTT VAIPTAEAAG
LAVELLNALR EAGGRIDDAS RVRIASLPRL VVRGTTAAVS GRRFM
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