Gene BamMC406_5449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5449 
Symbol 
ID6181364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2688053 
End bp2688541 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content66% 
IMG OID641685204 
Producthypothetical protein 
Protein accessionYP_001812109 
Protein GI172064458 
COG category[S] Function unknown 
COG ID[COG4922] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.744205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCA CACGCACGAT GGCGGCACGG GCCGCGCGAT GGACGCGATG GATGGCCGCG 
GCGACGTTCG CGGTGACGGC CGCGCATGCG GCGGCGGTCG GACCGGATCA AGCCCAGCAG
GAAGCGAATC GTCGCACGGT GCTGGCGTTC TACGAGAAAG GCCTGAACGA GAAGGATGCC
GATGCCGCGC TCGCGTATGT CGGCGACCAG TACGTGCAGC ACAACCCGAA CGCGGCCGAC
GGGCGTGACG GTTTCCGCAA GTTCGTCGCG TTCCTGCGCG ACAAATATCC GCAGTCGCAC
AGCGAGATCA AGCGCGCGTT CGTCGACGGC GACTACGTGA TCCTGCACGT GCATGCGGTG
CGCGAGCCCC GCACGCACGG CAGCGCGATC ATGGACATCT TCCGGCTCGA GCACGGCAAG
ATCGTCGAGC ACTGGGACGT GAACCAGCCC GTGCCCGAGC ATGCGGCGAA CGGGAACACG
ATGTTCTGA
 
Protein sequence
MGRTRTMAAR AARWTRWMAA ATFAVTAAHA AAVGPDQAQQ EANRRTVLAF YEKGLNEKDA 
DAALAYVGDQ YVQHNPNAAD GRDGFRKFVA FLRDKYPQSH SEIKRAFVDG DYVILHVHAV
REPRTHGSAI MDIFRLEHGK IVEHWDVNQP VPEHAANGNT MF