| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5384 |
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| Symbol | |
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| ID | 6181174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2619070 |
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| End bp | 2620122 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641685139 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001812044 |
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| Protein GI | 172064393 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.525694 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCC AGTTGCCTCT TTCTGCCGTC CATATCGTCG AATTCGAAGG TCTCGGCCCC
GGCCCGCTCG CGGGCTGGAT GCTCGCCGGA ATGGGCGCGC GCATCACGCT GATCGCGCGT
CCGGCCGGCC GCACGAGTGC GCCGGACGCG TTGCAGGGCC GCGACGGCGA CCTGCTGCGC
GAAGGCAAGA CGGTCGTCGA ACTCGATCTG AAGACACCGG ACGGCCGCGA TGCGGCGCTC
GCGCTGATCG CGCAGGCCGA TGCGCTGATC GAGGGGCTGC GACCGGGCGT GATGGAGCGT
CTCGGCCTCG GGCCCGACGC TTGTGTCCGC CGCAATCCGA AGCTCGTGTA CGGACGGATG
ACGGGCTGGG GCCAGGACGG GCCGCTCGCG ACTGCCGCCG GGCACGACCT GAACTACGTC
GCGCTGACGG GGCTGCTGTC GCTGTCCGCG CCGCGTGATG ACCGGCCGGG CGTGCCGCCG
ACCGTCGTCG GCGATGCGGG CGGCGCGCTC GGGCTCGCGT TCGGGATCGT CTGCGCGCTG
TTCGACGTGC GCGGCGGCGG CCCGGGGCGC GTGGTCGACG GCGCGATCGT CGACATCGTG
TCGATGCTCG GCTCGCTCGC GCTGTGGGCG CGTGCGAACG GGCAGCTCGA CGGCGCGCAG
CCCAGCCTCT TCCACGACGC GCCGTTCTAC GACGTATATC GCTGCGCGGA CGGCGAATGC
GTGACGATCG GCGCGCTCGA GCCGCCGTTC TATGCGCTGC TGGTCGAGCG GCTCGGGCTG
GCTGACGTCG ATCCGGCGTC GCAGTACGAC CGCGCGCGCT GGCCGGCGCT GAAGGCGCGT
TTCGCCGAGG TATTCGCGCA GCAGCCGTCC GCGCACTGGC GCGCGCTGCT CGAAGGCAGC
GACGCGTGCT TTGCGCCGGT GCTGAGCGTG GCCGAAGCGG TGGAGCACCC GCACAATGCG
GCGCGCGGGA TTTATCGCAT CGACGGGGAC GGCAACGTCC GGGCGCGCGT GGCGCCGAGA
TTTTTGCCGT TGAGGGGCGA CGACGCGGAA TAG
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| Protein sequence | MSIQLPLSAV HIVEFEGLGP GPLAGWMLAG MGARITLIAR PAGRTSAPDA LQGRDGDLLR
EGKTVVELDL KTPDGRDAAL ALIAQADALI EGLRPGVMER LGLGPDACVR RNPKLVYGRM
TGWGQDGPLA TAAGHDLNYV ALTGLLSLSA PRDDRPGVPP TVVGDAGGAL GLAFGIVCAL
FDVRGGGPGR VVDGAIVDIV SMLGSLALWA RANGQLDGAQ PSLFHDAPFY DVYRCADGEC
VTIGALEPPF YALLVERLGL ADVDPASQYD RARWPALKAR FAEVFAQQPS AHWRALLEGS
DACFAPVLSV AEAVEHPHNA ARGIYRIDGD GNVRARVAPR FLPLRGDDAE
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