| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5358 |
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| Symbol | |
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| ID | 6180231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2580318 |
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| End bp | 2582060 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641685113 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001812018 |
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| Protein GI | 172064367 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCGT CCGTTTTTGC GCAGACCACG CCCGCGCCGG CCGTTCGCCC GATTCAGGAT
CCGGCGCAAC TGATCATCGA ACAACAGCGC GAGCAGGCGC GGCAACGCCA GCTTGATCAA
CCGCCCGCAT CGATCACGGT CGCGCCGACG ACAGGGACGT CGCTCGACAT TCCTCCCGGT
ACGCCTGTCG AATCGATCAT CGAGACGGGG CCGACCTTTG CCGTGAAGCG AATCGAGCTG
CAAACGCCCG ACGGCAAACC GTTCGATCCG CCGCGCGGCA TCTCGACCAA GCAACTCGAT
GTCATTGTGA AATCGTTCGT CGACCATGAG CTTGGCTCGC ACCGCATCAA TGTATTGCTG
AAGAGGATTA CTGACGTATT CATCGAGCGC GGCTACGTCA CGACCCGCGC GCTTCTCGGT
CCGCAGAATC TCGCGACCGG TACGCTCAAG ATCACGATTC AACTCGGTGT GATCGAAGCT
TTCACGGTCA ACGGCAAGCC GATTCATCGG CTCAAGGCGG GTGAATCGTC GTCGGGTGGC
GGCTGGCTTA CGGACGCCGG CTACGAGAAC GCGTTTCCGA CGTCGTCCGG CGATCCGCTG
CGTTTGTCGG ACATCGATCA GGGTGTCGCG CAGATCAATC GACTGCGTCG CAACCAAGCG
ACCGTCCAGA TCCTGCCCGG CCAGAATCCC GGCGAATCGA TTGTTGACAT CGGCAACAAG
CCGGGCGATC GCCTCTACTA CACGTTGGGC GTCGACAACT ACGGCAGCTC GGCCACGGGC
GTGACACGCT ATCGCGCAGG CGTCGAGGCT GACAACCTGC TCGGCCTGCA GGAGTCGCTG
AGCCTCAATT TCCTCGACAG CCTCGACAGC AACGCGATCG TCGGTTCGTT CGCGGTGCCG
TTCGGCCGCC ATACGTTCAG CTACACGATT TCCGATTCGG AATATCAGCA GCTGATCGGC
ACGACCGCGC TTGAATACGG CCGCACGCTT TCGCACATCT TCGGCTGGAA TTATCTGGTC
AGCCGCAGTG TGAGCGACAT CACGAGCGTC GACGCCACGG TGTCCTGGCG GCGCACCGAC
CGTGAAGTCA ACGGCATCGA TCTGGATCCG CAGCGTGTCG CCGTGTTCAG GCTCGGTGGC
AGCTGGCTGC ATAAGTTCGT GATGAACGAC GCGCAGGGCA ATTTCACGGT CAACGGCGGA
GTGTCGCAGG GGCTGCCGTG GTTTGGTGCA AATCACGATC CCCACGGCAT CACGCGGGAT
GAGGCGCATA GCCAGTTCAC GAAGGTGGAT GCAACCGCCG CCTTCACGTT GCCGTTGCCG
AAGATCGGCC GTGCGCTGCT CGCATACCGG GGCGTGCTCG GCGGGCAATA TACGAACATG
GCGCTATTCG GATCGGAGCA ACTGTATCTC GGCGGCATGG ACACGATACG CGGCTTCCGA
TCCGGCGAGA TCGCCGGCGA TCGTGGGTTC TACTCGCGCA ACGAACTCGC CTGGGTGAAC
GCGCCGGCGT GGAAGGACGG TCGAATCGAA CCGTATGTCT TCATCGATGC AGGCAAGGCA
AGCCTCGTGG CGATACCGGG TTTCCCGACG CTCGCTGGTG CTGGCGGGGG GCTGCGTGTG
CAATGGCAGT GGCACAAGCA GTCCCTGTCC GGTGAGCTGC TGCTCGGCCG TGCATTGGTG
CAACCAGCCG CGCTTGGTAG CAAGGCGAAG CTGGTGCTCG GAACGTTGAA CTGGTTTTAC
TAG
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| Protein sequence | MHASVFAQTT PAPAVRPIQD PAQLIIEQQR EQARQRQLDQ PPASITVAPT TGTSLDIPPG
TPVESIIETG PTFAVKRIEL QTPDGKPFDP PRGISTKQLD VIVKSFVDHE LGSHRINVLL
KRITDVFIER GYVTTRALLG PQNLATGTLK ITIQLGVIEA FTVNGKPIHR LKAGESSSGG
GWLTDAGYEN AFPTSSGDPL RLSDIDQGVA QINRLRRNQA TVQILPGQNP GESIVDIGNK
PGDRLYYTLG VDNYGSSATG VTRYRAGVEA DNLLGLQESL SLNFLDSLDS NAIVGSFAVP
FGRHTFSYTI SDSEYQQLIG TTALEYGRTL SHIFGWNYLV SRSVSDITSV DATVSWRRTD
REVNGIDLDP QRVAVFRLGG SWLHKFVMND AQGNFTVNGG VSQGLPWFGA NHDPHGITRD
EAHSQFTKVD ATAAFTLPLP KIGRALLAYR GVLGGQYTNM ALFGSEQLYL GGMDTIRGFR
SGEIAGDRGF YSRNELAWVN APAWKDGRIE PYVFIDAGKA SLVAIPGFPT LAGAGGGLRV
QWQWHKQSLS GELLLGRALV QPAALGSKAK LVLGTLNWFY
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