| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5351 |
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| Symbol | |
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| ID | 6180559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2572810 |
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| End bp | 2573793 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641685106 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001812011 |
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| Protein GI | 172064360 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.272634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC AAACCTCCGA ATTGCCCGCC ACAGGCGGGT CTGCGCGCAT TCAGGTCGTG
CCTGTCGACG GCGCCGGCTA TCGTTTCGAG CTAATGGAAA CCTTCGTGCG CATAGTCGAG
GCCGGCAGCC TGTCGGCGGC CGCCGCGCAA CTCCACACGA CGCAGCCGAC CATCAGCCGG
CGGCTGCAGG CGCTCGAACG CTCGCTCGGG ATGCGGCTGC TGCAGCGGAC GACCCACGCG
ATGCGGCTGA CCGTCGACGG CGAGCGCTGC TTCACGCGCG CGAAGGAGCT GCTCACGAAC
TGGGCGGCGT TCGAGGCCGA CCTGCGCGGC GCGCAGGAGG AACCCGACGG CCTGCTGCGG
GTCGCGGTCC CGCATGCGTT CGGGCAGGAG CGCTTCGTCG AGCCGCTCGC GCGATTCCTG
CGTGACTACC CGCGCGTCTC GGTGGAATGG CTGCTGCAGG ACGAGGTGCG CGATTTTGTC
GGCAGCGGGA TCGACTGCGC GATCCAGGTC GGCGAGCCGA CCGATCCGTC CGTCGTCGCG
ATCCGGCTGA GCAAGGTGCC GCGCTTCGTG GTGGCCGCGC CGTCCGTGCT GAACGGCGCC
GACGTGCCCG CCGATCCCGA CGCGCTCGCC GCATTGCCGT GGCTCGCGCT GCGCACGTAT
TACCGGACCG AGCTGACGCT GACGCACACC GTCACGGGCG ATACGCGCCG CATCGCGATG
CGGCCGCGCA TCACGACCGC GAATCTCTAC GCGCTACGCA GCGCGGCGCT GCTCGGTGTC
GGCGCGTGCG TCGGTTCGTC GTGGATGCTG GCGGACCATC TCGCGCGCGG CGAACTCGTG
CATCTCGCGC CCGACTGGTA TGCCGCGCCG TTGCCGGTTT ACATCACCTA CCCGCACGCG
CAGTTCTATC CGTCGCGGCT TGTGCGCTTC GTTGCGATGA TGCGCGAGGC CGTGCCGCCG
CTCGTCGAAG GGCGCGACGG GTAG
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| Protein sequence | MTEQTSELPA TGGSARIQVV PVDGAGYRFE LMETFVRIVE AGSLSAAAAQ LHTTQPTISR
RLQALERSLG MRLLQRTTHA MRLTVDGERC FTRAKELLTN WAAFEADLRG AQEEPDGLLR
VAVPHAFGQE RFVEPLARFL RDYPRVSVEW LLQDEVRDFV GSGIDCAIQV GEPTDPSVVA
IRLSKVPRFV VAAPSVLNGA DVPADPDALA ALPWLALRTY YRTELTLTHT VTGDTRRIAM
RPRITTANLY ALRSAALLGV GACVGSSWML ADHLARGELV HLAPDWYAAP LPVYITYPHA
QFYPSRLVRF VAMMREAVPP LVEGRDG
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