| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5274 |
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| Symbol | |
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| ID | 6180968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2488957 |
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| End bp | 2490090 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641685029 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001811934 |
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| Protein GI | 172064283 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0726879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGGC TCCTGACACG CATCGCGCCG CCGGTTCAGC GGGCGCCGAT CGCGCTCGCA
TGCTGTGCAA TTCTTCTGAC GGCTTGTCAT TCGCATGAGG CCCCCGCGCC CGAACCGCGG
TCGGTGGTCG CGCTGCCGGC TCACGCAGAC AGCGGCGCAT CGCAGCGCGT GCTGCCGGCG
CAGGTCCAGG CGCGCTATTC GACGGCGCTG TCGTTCCGGG TCGGCGGCAA GATCATCGAG
CGGCGCGTGC GCATCGGCGA CACCGTGAAG GCCGGACAGA CGCTCGCGGC CCTGGATCCC
GCCGATCTGC ACAACACGCT GCTCAATGCC CGCGCACAGC TCGACGCCGC CGAGCATCGG
GTCGTCTACG CGAAGCAGCA GCTGGAGCGC GACCGCGCGC AGGCACAGGC GGCGCTGATC
GCCCCTGCGC AGCTCGAGAC AACCCAGGAT GCCTATACGT CGGCGGTCGC ACAGCGCGAT
GCCGCGCTCG CGCAGATGGC GCTCGCCGGA GATCACCTGC GCTACGCGAC GCTCGTCGCG
GATCACGACG GCGTCGTCAC GTCCGAAGAT GCCGATACCG GGCAGAACGT CGAGGCCGGC
CAGGCAGTGT TTCATCTGGA CTGGAGCGGC GAGCTCGACA TCGTGTGCGA CGCTTCGGAG
CGCGACCTGC GCGATCTTGC GATCGGCCGC GGCGCGCGCG TCAGCCTGAC GGCGCTGCCG
GGCAAAGTGT TCGATGCGCG CGTGCGCGAG GTCGCGGCCG CGGCGGATCC GCAAAGCCGC
ACGTGGCGGG TAAAACTGAC GCTGATCGCG CCGAGCCCGG ACGTGCGCTC CGGGATGACG
GCCAACGTCG CGTTCGACGG CAGCACCGAT GCCGCCGCGG ACCATACGAT CACGCTGCCG
GCCACCGCGC TCTTTCATCG CGGCGAAGCG CCGGCGGTCT GGGTCGTCCG CAAGGGCAGC
GACACGCTGG AACTGCGCAC GGTGTCGATC GGACGCTACG ACGAACGCAC GGTGTCCATC
ACGTCGGGGC TCGCGAGCGA CGAGCGCGTC GTGATGCAAG GTGTCCATAC CGTCACCGCC
GGCGAACGCG TGCGCGTCGT GCCGCCGCTG CATCCGGAGG ACTTCCCGTC ATGA
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| Protein sequence | MRRLLTRIAP PVQRAPIALA CCAILLTACH SHEAPAPEPR SVVALPAHAD SGASQRVLPA
QVQARYSTAL SFRVGGKIIE RRVRIGDTVK AGQTLAALDP ADLHNTLLNA RAQLDAAEHR
VVYAKQQLER DRAQAQAALI APAQLETTQD AYTSAVAQRD AALAQMALAG DHLRYATLVA
DHDGVVTSED ADTGQNVEAG QAVFHLDWSG ELDIVCDASE RDLRDLAIGR GARVSLTALP
GKVFDARVRE VAAAADPQSR TWRVKLTLIA PSPDVRSGMT ANVAFDGSTD AAADHTITLP
ATALFHRGEA PAVWVVRKGS DTLELRTVSI GRYDERTVSI TSGLASDERV VMQGVHTVTA
GERVRVVPPL HPEDFPS
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