Gene BamMC406_5272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5272 
Symbol 
ID6180853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2487240 
End bp2487761 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID641685027 
ProductTetR family transcriptional regulator 
Protein accessionYP_001811932 
Protein GI172064281 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.118742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG CCGGGTTCAC CCACGGCGGC TTCTACAAGC ACTTCCGCTC AAAGGCCGAT 
CTGATGGCGG AATCGGCGGC CTGCGGCATG GCGCAGACCG TTGCGCTGTC GGCCGGGGTG
GACGCAGCGG AATTCGTGCG ACAGTATCTC GCGCGCGAGC ACCGCGACGC GCGCGCAACC
GGCTGCACGA TGGCCGCGCT GGGTGGGGAT GCCGCGCGTC AACCCGAAGC GGTCCGGGCC
ACATTCGCGG ACGGCATCGA AAGACTGCTG GCGGCGTTAG TCCAGGAACG TGATCCGTCA
GATGGCTCAG CCTCGGCGGA GGCGCGAGCC GACTGCCTCG ACATCATGGC GCATGCGGTC
GGCGCGATTG TGTTGTCGCG CGCATGCCCG GATGATTCGC CACTGGCCGA CGAAATCCTG
ACGGTATGCC GCGACAAGAT TCTCGCGACA CTCGGTCCGT CGAAGACAGC GCGCGAACCG
GGCCGCAATC ATGGTAACGA CGGCTTGGCC AAGTCGAAGT GA
 
Protein sequence
MSAAGFTHGG FYKHFRSKAD LMAESAACGM AQTVALSAGV DAAEFVRQYL AREHRDARAT 
GCTMAALGGD AARQPEAVRA TFADGIERLL AALVQERDPS DGSASAEARA DCLDIMAHAV
GAIVLSRACP DDSPLADEIL TVCRDKILAT LGPSKTAREP GRNHGNDGLA KSK