| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5258 |
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| Symbol | |
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| ID | 6181432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2467655 |
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| End bp | 2469064 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641685014 |
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| Product | type III effector Hrp-dependent outer |
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| Protein accession | YP_001811919 |
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| Protein GI | 172064268 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.69157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAA AATCCGAACA ATCAGCTGCG GCACTGAGGC TGGCTTTCTA CGGCGACGAC
TTTACCGGAT CGACGGACGC TCTCGAGGTC CTGGCCTTCG CGGGGCTTAG GTGCGCGCTT
TTTTTGAAAG CGCCTTCGTC CCAAAAACTA TCGCAACTCG GCGGGTTCGA CGCCATCGGT
GTCGCAGGCG ACAGCCGAGG CATGAGTCCG TCCGAAATGG ATCGGTCTCT TCCACCGCTG
TTCGAAGCTC TGCACGCCCT CGATGCGCCG ATCCTTCACT ACAAAGTCTG TTCGACTTTC
GATAGCGGCC CGGCGATAGG AAGCATCGGC AGAGTCTTGG AGATAGCCCG AGCGGGGATC
ACTCGGAATC CAGTTCCGAT TGTTGCCGGT ACGCCGGCAT TGAAGCGCTA CTGCGCATTT
GGCAATTTGT TCGCTCGGTC TGGTACCGAC AACAAGACTT ATCGAATCGA TCGCCATCCA
ATTATGAGCG CCCACCCGGT CACACCGATG GCCGAGGGAG ATCTTCTGCG TCATCTAGCT
CTGCAGACCG CTTTGCCTCT CTCCGGCTTC CAGCTGCCGA ATCTGGAAGG TACTCGCGAA
GAAGTCGACC TGGCATGGTC GAAAGCAATT TCAACGGGCG ACTCGGGAAT CTTGCTCGAT
TCAGTGACTC CACGTCATCT AACCGAAGTT GGCCGGCTCC TCGACAACTA CGCTACGGCG
GTCGGCTCCG TATTTACAAT CGGCTCGTCT GGCGTCGAAT ACGCGCTGAC TCAATGGTGG
CGAGAACTCG GTAGCCTTCC CGAAACGCAG CGGTCTTATG ACCGTATTGC GCCGACGACT
CAGATCCTTG CCATCTCCGG AAGCGCCTCA CCGCTGTCGT CGGCACAGAT CGACGCAGCG
ATCACTGCAG GCTTCGCCGA AATCGCCATC GACGCAAAAG CGCTCGTTCG AGAAGATTCT
TGGCAACGGA CCGCTCAAAA TATCGCCGTC CGCACGATTG CGCTGCTCAG TGAAGGGCGC
AGCGTCATTA TGCATACCGC CCGTGGCCCG AGCGATACAC GCATCGCCGA AATGCTCGAG
TACTTTACCG CTCGCGGACT GACCCATGAC GACGCTCGGC ATCAAGGTGG TCGATTGCTT
GGGCAACGGC TTGGCGCAAT TGCGAATGAT GTCCTCGAAG CCACTCACCT GCAACGACTG
GTTCTCTCAG GCGGAGATAC GTCCAGCCAA GTCACACAAG TCCTTGGCCC TGACGCACTT
GAGATTGACG GTCGCCTGGC CGTGGGCGCA CCGCTGTGCC GTGTAATTTC CGAAAAGCCT
CATTTGCGAA ACCTTCAGCT TGCTCTGAAA GGTGGGCAAA TGGGCGACCA AAACTTTTTT
GTCATCGCAC GCGATGGCAT CACGAGATGA
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| Protein sequence | MSAKSEQSAA ALRLAFYGDD FTGSTDALEV LAFAGLRCAL FLKAPSSQKL SQLGGFDAIG
VAGDSRGMSP SEMDRSLPPL FEALHALDAP ILHYKVCSTF DSGPAIGSIG RVLEIARAGI
TRNPVPIVAG TPALKRYCAF GNLFARSGTD NKTYRIDRHP IMSAHPVTPM AEGDLLRHLA
LQTALPLSGF QLPNLEGTRE EVDLAWSKAI STGDSGILLD SVTPRHLTEV GRLLDNYATA
VGSVFTIGSS GVEYALTQWW RELGSLPETQ RSYDRIAPTT QILAISGSAS PLSSAQIDAA
ITAGFAEIAI DAKALVREDS WQRTAQNIAV RTIALLSEGR SVIMHTARGP SDTRIAEMLE
YFTARGLTHD DARHQGGRLL GQRLGAIAND VLEATHLQRL VLSGGDTSSQ VTQVLGPDAL
EIDGRLAVGA PLCRVISEKP HLRNLQLALK GGQMGDQNFF VIARDGITR
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