| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5151 |
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| Symbol | |
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| ID | 6180516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2326580 |
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| End bp | 2327692 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684903 |
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| Product | porin |
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| Protein accession | YP_001811813 |
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| Protein GI | 172064162 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTC TCTACAAGCT CGCTCCGCTC GCGATGCTCG GCGCCTTCGC GACCCATGCC
GGTGCGCAAA GCAGCATCAC GCTGTACGGT CTCATCTCGG CCGGCGTCGG GTACGCGACC
AACCAGGGCG GCAAGAACGC CTGGCAGGCG CTGTCCGGCA CGAACCAGAA CCCGCGCTGG
GGGCTGAAGG GCAAGGAGGA TCTCGGGCAA GGGCTGTCGG CGATCTTCCA GCTCGAGAAC
GGCTTCAACG TGATGACGGG CACGGCCGCG CAGAACGGCC GCGAGTTCGG GCGCATGGCA
TACGTGGGCC TTGCCGACCG CACCTACGGG TCGCTGACGT TCGGCCGCCA GTACGACGCG
ATCCACGACT ACATCGGGCC CGTGATCATC GCGAGCAACG GCGTGAACAT CGGCGACAAC
GACAACGGCT ACAACGACAT CCGCGTGCAG AACTCGGTGA AGTACGTGAG CTCCGTGTAC
TACGGCCTGA AATTCACCGC GCTGTACGGC TTCAGCAACG CGACGGGCTT CGCGAACAAC
AGCGCGTACA GCTTCGGTCT CGGCTACGAG CGCGGCCCGC TGCGCTGGAG CGTGGTCTAC
GCGCAGTACA ACCATCCATA CAGCAGCACG AATCCCGACG GCGCGATCGC GAACGACTAT
GGTTCGCCGC TCCTGATCTT CGCGAAGAGC GCGATGTCGC CGGCGGTATT CGCGAGCCGG
CAGCGCATCG TGGGCACGGG CGGCTTCTAC ACGATCGGCC GCGCGCAGTT CGCGGCGCTG
TTTACCGACG TGCGCTACGA TTACCTCGAC AATTCGCATC TGCACCTGCA GAACGTCGGC
GTGAACATCG TCTATACGAT GACGCCGCAG CTCTTTCTCG GTGCCGCGTA TGCGTTCACG
AACGGCAAGT ACGACGTGAT CGACAAGCGG CCGAAATGGC ATCAGGTGAA CCTGCAGGCC
GACTACTTCC TGTCGAAACG CACCGACGTC GCGCTGACGG TGATCGCGCA GCAGGCGGCC
GGCGACGCGC AGCACGCGCA GATCTTCGCG TACGCACGCT CGACCGGCAC GCGCCAGATG
ATGGCGACGC TGGGCGTGCG GCACGTATTC TGA
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| Protein sequence | MKTLYKLAPL AMLGAFATHA GAQSSITLYG LISAGVGYAT NQGGKNAWQA LSGTNQNPRW
GLKGKEDLGQ GLSAIFQLEN GFNVMTGTAA QNGREFGRMA YVGLADRTYG SLTFGRQYDA
IHDYIGPVII ASNGVNIGDN DNGYNDIRVQ NSVKYVSSVY YGLKFTALYG FSNATGFANN
SAYSFGLGYE RGPLRWSVVY AQYNHPYSST NPDGAIANDY GSPLLIFAKS AMSPAVFASR
QRIVGTGGFY TIGRAQFAAL FTDVRYDYLD NSHLHLQNVG VNIVYTMTPQ LFLGAAYAFT
NGKYDVIDKR PKWHQVNLQA DYFLSKRTDV ALTVIAQQAA GDAQHAQIFA YARSTGTRQM
MATLGVRHVF
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