Gene BamMC406_5050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5050 
Symbol 
ID6179296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2217736 
End bp2218467 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content71% 
IMG OID641684802 
Productalpha/beta hydrolase fold 
Protein accessionYP_001811712 
Protein GI172064061 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCC CCACCCCGCC CGTCGTCTTC GTCCACGGTT TCATCGGTAC GTTCGACGTG 
CCCGAATGGC CCGGCCCGCA TCTCGCCCCC GACCTGCTCG GGTACGGTAT CTACCGCGCC
GCGCCGTTCG ACGCGATCAC GCTCGCCGCG CAGGTCGAGC ACGTGCGGCA GGCCGTCGAC
TCGCACTACG GCGCGCAGCC GGTGGACCTC GTCGGTCACT CGGTGGGCGG CGCGATCGCG
ATGCTGTTCG CGCATGCGCA TCCGGCACGC GTGCGCCGCA TCGCCAACGT CGAAGGCAAC
TTCACGCTCG ACGATGCGTT CTGGTCGGCG TCGGTCGGCC GCATGTCGCC CGCGCAAGCC
GACGCGATGC TCGACGCACT GCGCGGCGAC CCGCTCGGCT GGCTGCGCGG CGCGATCGAC
GATCCGTCGC CGCGCCAGCT CGACGACGCG CGCCGTTGGC TTGCGCATCA GCCGGCAGCG
ACGCTGCGCG CGATGGGCCG CTCGGTCGTC GGGACGACCG GCGAATCCGG TTATCTGCAG
GCGCTTGCGG AAGTATTCGA GCGCCATGCG GTGTGGCTCG TCGCCGGCGA ACGCTCACGT
GCGGGCTGGC ATGTGCCGGA CTGGGCGCTC GCACGCTGTG CCGGCTTCGA AACGATCGCC
AACTGCGGGC ACCTGATACC GGCCGAGCGG CCGGCCGCGT TGCGGGAGAC GCTCGCGCGC
TGTTTCGGCT GA
 
Protein sequence
MSAPTPPVVF VHGFIGTFDV PEWPGPHLAP DLLGYGIYRA APFDAITLAA QVEHVRQAVD 
SHYGAQPVDL VGHSVGGAIA MLFAHAHPAR VRRIANVEGN FTLDDAFWSA SVGRMSPAQA
DAMLDALRGD PLGWLRGAID DPSPRQLDDA RRWLAHQPAA TLRAMGRSVV GTTGESGYLQ
ALAEVFERHA VWLVAGERSR AGWHVPDWAL ARCAGFETIA NCGHLIPAER PAALRETLAR
CFG