Gene BamMC406_5033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5033 
Symbol 
ID6180474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2198500 
End bp2199069 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content67% 
IMG OID641684785 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_001811695 
Protein GI172064044 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2020] Putative protein-S-isoprenylcysteine methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.46797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATCG TTCAGACCAT CGCCATCGTC GTTCCGTGGG CCGCGTGGCT CGCCTACTGG 
ATCATGACGT CGCAGGCCGT GAAGACGACC GTGCGCAAGG AGGCGTCGCG CTCGCGCACG
CTGCAGTCGA TTCCGCTGAT CGTCGGCGGC GCGCTGGTCA TCCTGCCCGA CCTGACCCTG
CGCGCGTTGG TGCCGGACTG GCACCGTTTC GGCCTGCAGG CCCAGTGCGG GCTCGCGGTG
CTGGTCGCGG GGCTGTGGTT CTCGGTGTGG GCGCGGCTGC ATCTCGGCAC GAACTGGAGC
GTGTCCGTCA CGCTGAAGGA GAACCACGAA CTCGTCCGCA CCGGCCCGTA TGGCCTCGTG
CGTCATCCGA TCTACACCGG CTGTCTTATC GCGCTGGTGG GCGCCGCGCT GATCGGCGGC
GAGTGGCGCG GTGCATTCGG TGTCGCGCTG GTGTTCGCGT CGCTCGCATA CAAGGTGCGC
GTCGAGGAGA GCTGGCTGAC CGGCCATTTC GGGCCGGCAT ATGCGCAGTA CCGTCGCGAA
GTCGCGGCGC TGATCCCCGG TTTCTACTGA
 
Protein sequence
MNIVQTIAIV VPWAAWLAYW IMTSQAVKTT VRKEASRSRT LQSIPLIVGG ALVILPDLTL 
RALVPDWHRF GLQAQCGLAV LVAGLWFSVW ARLHLGTNWS VSVTLKENHE LVRTGPYGLV
RHPIYTGCLI ALVGAALIGG EWRGAFGVAL VFASLAYKVR VEESWLTGHF GPAYAQYRRE
VAALIPGFY