| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5003 |
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| Symbol | |
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| ID | 6179165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2158291 |
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| End bp | 2159010 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684755 |
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| Product | PepSY-associated TM helix domain-containing protein |
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| Protein accession | YP_001811665 |
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| Protein GI | 172064014 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3295] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.862813 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGTTG CCGACCCCAT TGAAATCGAC GCGGCGCCCG TGTCGCCCGC GTCACGCGTT
GCGCCGCGCG CGCGTGTGGC CCGCGCGGGC CACACGCGAT CGCGCCGCGG TACGTTCATC
AAGTGGCTGC GCAAGGTGCA CGGCTGGGTC GGCCTCTGGG GCGCCGCGCT CGGCCTGCTG
TTCGGCGCGA CGGGGTTCCT GCTGAATCAT CGCGCGCCGC CGCTGCGGAT CCAGACCGGT
GCGCCGCGTG TGGAGACGTT GCGGCTCGAC GTGCCCGACC CGGAACCCGA TTCGCCGCTC
GCGCTCGCGA AATGGTTGCG CGGGCAACCG GATCTGCATT TGCCGGAACG GATGGGGCGC
GTGCAGAAGG AACCCGAGCA TCCGGTTGCA TGGGGCGAGC ACGAGACCGT GCAGCCCGAA
CACTGGCAGC TCGTGTTCGC GTCGCCGCGT GAAAGCGTCG CCGTCGACTA CTGGGTCGGC
AGCGACACGA TGACGCTCAA GCGCACCGAC AGCACCACGC TCGCGTGGCT CACGAACCTG
CACAAGGGCG TCGGGATGAG CATCGGTTGG GTGCTGCTCG TCGACACGCT CGCGGGCGCG
TTGATCCTGC TGTCGCTGAC GGGCGTGCTG TTGTGGACCG AACTGAACAA GCGCAAGACG
ATCGGCGTGG TGCTCGTGAT CGGCTCGATC GTCGCGATCG TGTGGGCGGC TGGTGCGTAA
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| Protein sequence | MSVADPIEID AAPVSPASRV APRARVARAG HTRSRRGTFI KWLRKVHGWV GLWGAALGLL
FGATGFLLNH RAPPLRIQTG APRVETLRLD VPDPEPDSPL ALAKWLRGQP DLHLPERMGR
VQKEPEHPVA WGEHETVQPE HWQLVFASPR ESVAVDYWVG SDTMTLKRTD STTLAWLTNL
HKGVGMSIGW VLLVDTLAGA LILLSLTGVL LWTELNKRKT IGVVLVIGSI VAIVWAAGA
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