| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5000 |
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| Symbol | |
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| ID | 6181253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2154734 |
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| End bp | 2156452 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684752 |
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| Product | peptidase |
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| Protein accession | YP_001811662 |
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| Protein GI | 172064011 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3227] Zinc metalloprotease (elastase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.475942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACAT CACGCAAAGC ATTGCCGATC GCCCTGGGTC TCGCGCTCGG TTTCGGCATC
GTCGGCGGCA GCGCGGCCGA TTCCAAGGTC GGGAACCCGC AGGCGTCGAG CCTGCGAGAA
AGCCTGACAC GCGGCGTCGC ATCGGCGCCG GCCGCGGCCA GGACCGATAC GGCCGCCGGG
CAGTTCCGAG CCGACGGCGT CGCCGTCACG CTGTACAACC CCGCGTACCA CGCGAAGAAG
GCGGCCGCCA CGCCCGCCGC CACCGCGCGC GACTTCGTCG CGTCGCAGGC GACGCAGCTC
GGGCTCGACG CGGCCGCGCT GGCGAGCCTC GCGGTGACGT CGGAGCGCAA CGACACCGAC
TTCACCGTCG TGCGCTTCCA GCAGCAGGCG GCCGGGCTGC CCGTGTACGG CAGCGAGATC
GCGGTGACCG TCGCGAAGGA CGGCCGCATC CTGTACGTCG CGAGCAACAC GATCAGCGGC
GTGATCGCCA CCGCGCGCAA GGCGCAGGCG GTCGACCAGC AGCAGGCGTT CGACCGTGCG
CGCGCGTATC TCGGCGTAAA CGGCTTCACG CACCTCGACG CGCAACTCGT CGCGTTCGTC
GACAAGGCCG GCACGCATAC CGCGTGGAAG GTGCGCGGCC GCCCGCAGGA CGGCCCCAAG
GGCGACTGGG AACTGCTGAT CGACGCGGAC AGCGGCGAAG TGCTGCGCGC CGAGGACAAG
GCGTTCTATG CGACCGACGG CACCGGTTTC GTGTTCCGGC CGGATCCGCT GTCTTCGACG
AAAAGCAGCT ACGGCAGCAC GGGCTACAAG GACAACAACG ACGTCGATTC CACGCAGCTC
ACGGCCGCGC GCGTGCGCGT GACGCTGAAG GATCTCGCGC TGTCGGGCTC ACGCTACACG
CTGTCGGGAC CGTATGCGTC GTGCGTCGAT TTCGATGCGC CGCGCGACGG CGCGTGCCCG
GCGCAGGCGA CGCCGGCGTT CGAATTCACG CGCGGCAATC TGTATTTCGA AGCGGTTAAC
GTGTACTACC ACATCGACAC GTTCCTGCGC TACGTGAACC AGACGCTCGG CATCAAGGCG
CTGCCGTACC AGTACACGGG TGGCGTGCAG TACGACCCGC ACGGCGAATC GGGCGACGAC
AACTCGTCGT ACTCGTCGAG CAGCGGCCGG CTGACCTTCG GTCAGGGCGG CGTCGACGAC
GCGGAAGATG CGGACGTCGT GATCCACGAG CTCGGCCACG GCATCCACGA CTGGGTGACC
AACGGCGGCC TGTCGCAACA GGAAGGCCTG TCGGAAGGCA CCGGCGATTA TCTCGCCGCC
GCGTACAGCC GCGACTTCAA TCAGTGGAGC CCGTCGGACA CGCAGTATCA GTGGGTCTAC
AACTGGGACG GCCACAACGA ATACTGGGGC GGCCGCGTGA CGAACTGGAA CGTCGGGCGC
ACCTACGCGC AGGCGCGCGG CGCGGAGATC CACACGGCCG GCCAGTACTG GGCTTCGTGC
AACCTCGTCG CGCGCGACGC GATCGGCGCG CAGGCGATGG ACAAGGCGTT CCTGAAGGGG
CTGTCGATGA CCAACAGCTC GACCAACCAG AAAGCCGCCG CGCAGGCGGT GCTGACCGCC
GCGGCCGCGC TCGGCTACAG CAGCGCGCAG CTCACGGCGA TCGGCGACGC GTACAACAAG
AGCTGCACGT ACGGCGTGAC CGTGCCGCAG AAGTCGTAA
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| Protein sequence | MQTSRKALPI ALGLALGFGI VGGSAADSKV GNPQASSLRE SLTRGVASAP AAARTDTAAG
QFRADGVAVT LYNPAYHAKK AAATPAATAR DFVASQATQL GLDAAALASL AVTSERNDTD
FTVVRFQQQA AGLPVYGSEI AVTVAKDGRI LYVASNTISG VIATARKAQA VDQQQAFDRA
RAYLGVNGFT HLDAQLVAFV DKAGTHTAWK VRGRPQDGPK GDWELLIDAD SGEVLRAEDK
AFYATDGTGF VFRPDPLSST KSSYGSTGYK DNNDVDSTQL TAARVRVTLK DLALSGSRYT
LSGPYASCVD FDAPRDGACP AQATPAFEFT RGNLYFEAVN VYYHIDTFLR YVNQTLGIKA
LPYQYTGGVQ YDPHGESGDD NSSYSSSSGR LTFGQGGVDD AEDADVVIHE LGHGIHDWVT
NGGLSQQEGL SEGTGDYLAA AYSRDFNQWS PSDTQYQWVY NWDGHNEYWG GRVTNWNVGR
TYAQARGAEI HTAGQYWASC NLVARDAIGA QAMDKAFLKG LSMTNSSTNQ KAAAQAVLTA
AAALGYSSAQ LTAIGDAYNK SCTYGVTVPQ KS
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