Gene BamMC406_4985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4985 
Symbol 
ID6181357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2138886 
End bp2140085 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content58% 
IMG OID641684737 
Productmajor facilitator transporter 
Protein accessionYP_001811647 
Protein GI172063996 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATCA GAGGTCGATG GGCGCTCGTC TTCATCTGCA TCTCCCTGTC GTTTGGCAGC 
TTCGCGGATG AAGCAGCTCA AGTGAACTTT GCACTGAGGC TGGCTGACGA TACCGCATCG
GTATCGATAT TGCTGGCCGC CGGTCTCATC GGAGGCATTC TATCCGGCCC GCTCGCCCCG
ATGATCCTCC AGCGGATCGG GCCTCGCCAA ACGATTCCCG CGGTATTTCT CCTTCAGGCG
CTTCTGATCG CAGCAGCGTC CCTGGCCAAT CAGTTCTGGA GCTATATCCT CGTTTCATTG
GCGCTCGGAT CCACGGGGTC ACTTCTGTGG GCAGCAATCA TGGTGGCTAT TCCGAGCTAT
ACAACCGACG AGCGGTATAT CGATCGCGTC AATCGGATTA CCCAATCGGT GCGGAACATG
GGTTATGTGG GCGGCCCCGC TCTCGGCGGC TTGCTGTACG GGATGGTCGA CCGCTCACGG
GGGCTATTGC TGCTGGCTTT GCTGGTATTG ATCGCCGCGC CGGTCACTTC ATTATGTTTC
AACGCACTGG ATTCCTTCAT TCCGAAATCC GGTCGGGCCT CCACGCAAAC CAAGCAGAAG
GGACGACTCG ACCTGCTCGG TCTCTTTCGC ACGGCCGGCG TGATCCGTGC GGTCGCTCCG
CTGTTGATGA CGGTCGTGCT CACATCGACA CTCAATGTGC TCCTGATATT TCGAGTGCGT
ACTGAGCTGC AATTCAGTGC GGCGATCTAT GGACTTGTCA TCAGCGCATT GAGTGTGGGT
CTGATCGTTG GCCCCGTGCT GTTTGCAGGC CTGTTTGCGA GGCGCGGTGA TGCCGCCGGT
GCCTCCATCG CCGCCAGCCT CATCGGCGCC GGCATTTTGT GGCTCGCATT GAGTGACGCA
GCGTTAGCCA TCATGTGCGC CACGTTTCTG ATCGGCTCGG CAAACGGCAT CCAGAACGCG
CTAACGGCGA GTTTCATGAT GAAGGCGATT GATCCGCAGC GACGTGTCAA CCTGATGCCG
GCCTATATAT TTTGCATTCA GACTTCGGTG TTTCTCGGCT TTCTGAGCGC CGGCATGATC
AGTACGGCAC ACGTGAGCAT GGCTCTCGTG ATTGTGGGAG TCGCAACGGC GATTATCGGC
GCATGCGGCA TCGCGTTGAA TGTCAAGAAC AGACCAAGCA TGGTTACAAA AGGAGTCTGA
 
Protein sequence
MGIRGRWALV FICISLSFGS FADEAAQVNF ALRLADDTAS VSILLAAGLI GGILSGPLAP 
MILQRIGPRQ TIPAVFLLQA LLIAAASLAN QFWSYILVSL ALGSTGSLLW AAIMVAIPSY
TTDERYIDRV NRITQSVRNM GYVGGPALGG LLYGMVDRSR GLLLLALLVL IAAPVTSLCF
NALDSFIPKS GRASTQTKQK GRLDLLGLFR TAGVIRAVAP LLMTVVLTST LNVLLIFRVR
TELQFSAAIY GLVISALSVG LIVGPVLFAG LFARRGDAAG ASIAASLIGA GILWLALSDA
ALAIMCATFL IGSANGIQNA LTASFMMKAI DPQRRVNLMP AYIFCIQTSV FLGFLSAGMI
STAHVSMALV IVGVATAIIG ACGIALNVKN RPSMVTKGV