Gene BamMC406_4943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4943 
Symbol 
ID6180954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2089140 
End bp2089841 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID641684696 
ProductABC transporter related 
Protein accessionYP_001811606 
Protein GI172063955 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC TGGAACAGGT CCATACGCAC TACGGCGCGG TCGAGGCGCT CGCGGGCGTG 
TCGATCGAGG TGAAGAAGGG CGAGATCGTC ACGCTGATCG GCAGCAACGG CGCCGGCAAG
ACGACGCTGA TGATGACCGT GTGCGGCACG CCGCGCGCAT CGTCGGGCCG CGTACTGTTC
GAGGGCAACG ACATCACCGC GATGTCGACG CACCAGATCA TGCGGCAGGG GATGGCGATC
TCGCCGGAAG GGCGGCGCGT GTTCCCGAGC CTGACGGTGC TCGAGAACCT GAAGATGGGC
GGCTTCTTCG CGAGCCGTCA CGAGATCGAC GACGGCATCG AGCACGTGTT CAAGCTGTTT
CCGCGCCTGA AGGAGCGCGC GACGCAGCGG GCCGGCACGA TGTCGGGCGG CGAGCAGCAG
ATGCTGGCGA TCGGCCGCGC GCTGATGAGC AAGCCGCGCT TGCTGCTGCT CGACGAGCCG
ACGCTTGGCC TCGCGCCGCT CGTGATCGCG CAGATCTTCG ACATCATCCG GACGATCCGC
GACGAAGGTG TCACGGTGTT CCTGGTCGAA CAGAACGCGA ACAAGGCGCT CGGTGTGGCC
GATCGCGGCT ACGTGCTCGA AACGGGGCGC GTGGTGCTGG CCGACACGGG CGCGAACCTG
CTCGCGAACG ACCGGATCAA GCAGGCGTAT CTCGGCGGTT GA
 
Protein sequence
MLKLEQVHTH YGAVEALAGV SIEVKKGEIV TLIGSNGAGK TTLMMTVCGT PRASSGRVLF 
EGNDITAMST HQIMRQGMAI SPEGRRVFPS LTVLENLKMG GFFASRHEID DGIEHVFKLF
PRLKERATQR AGTMSGGEQQ MLAIGRALMS KPRLLLLDEP TLGLAPLVIA QIFDIIRTIR
DEGVTVFLVE QNANKALGVA DRGYVLETGR VVLADTGANL LANDRIKQAY LGG