| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4916 |
|---|
| Symbol | |
|---|
| ID | 6179737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 2066438 |
|---|
| End bp | 2067289 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641684668 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001811579 |
|---|
| Protein GI | 172063928 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTCG AGGCCGCGGC GCGGCATGGG AGCTTCGCGC GTGCCGCCGA CGAGTTGGCG
CTGACCGAAG GCGCGATCAG CCGGCAGATC GGCCGGCTGG AGATGTTCCT GGGCGTGTCG
CTGTTCGAGC GGGTCGGCAA CCGCGTTCGG GTCGCGCCGA ACGGCGCGCG CTACGCGGCG
CAGGTTCGCG AAGTGCTGGA TCGGCTCGAG CGCGACAGCC AGTACATGAT GGGGCAGCCC
GGCGACGGCG GCAGCGTGGA TATCGCCGTG ACGCCGACGT TTGCGACGCG CTGGCTGATT
CCACGGCTGA AGGATTTCCA GACGCGGCAT CCGAACATCA CCGTGCATTT CGCCGATCGC
GCCGAGCCGT TCGTGCTGGC TGGCAGCGGA TTCGATGCGG CGATTCATTT CGAGCATCCG
GCCTGGGCGG GCATGCATAC ATACCGGCTG TGCGAGGAGG TGCTGGTGCC GGTTTGCCAT
CCGTCGCTGC TCGCGGGCGG GGATCCGGAT GCGTTGCTGG GCACGCTGCC GCGCCTGCAC
AAGCGCCAGA CGCCTGATGC GTGGTCGGCG TACGTGCAGG AGACGAGGTT GCCGGTGAAC
AATCCGGCCT CCGGCGCGCG CTACGATCTG TACTCGATGC TGATCGCGGC GGCGCTGGCC
GGGCTCGGCG TCGCGCTGGT GCCGCGGCTC TATGTCGACG CCGAGATCGC GCAAGGATTG
CTCGCGGCGC CCTGGCCCGA CGGTCGGGGC GTGGTCAAGC GCTTCTGTCT CGTGTTGCCC
GACGCGCTGG AACTGGGCGA CGGTCCGCTG CAGACCTTCG CGCACTGGGT ACTGCGGCAG
GCGGACGCGT GA
|
|---|
| Protein sequence | MAFEAAARHG SFARAADELA LTEGAISRQI GRLEMFLGVS LFERVGNRVR VAPNGARYAA
QVREVLDRLE RDSQYMMGQP GDGGSVDIAV TPTFATRWLI PRLKDFQTRH PNITVHFADR
AEPFVLAGSG FDAAIHFEHP AWAGMHTYRL CEEVLVPVCH PSLLAGGDPD ALLGTLPRLH
KRQTPDAWSA YVQETRLPVN NPASGARYDL YSMLIAAALA GLGVALVPRL YVDAEIAQGL
LAAPWPDGRG VVKRFCLVLP DALELGDGPL QTFAHWVLRQ ADA
|
|---|
| |