Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4875 |
Symbol | |
ID | 6179361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2012676 |
End bp | 2013122 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684628 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001811539 |
Protein GI | 172063888 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000623298 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000014051 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGAAAC CCGCCAAGTT GACCGCCGTC GCGCTGTCCG TGTTCCGGCT GAACGGCCTG CTGATCGAAT GGGGCAATGC CTTTGCCGCG CCGCACGGCC TGACCAGCGC GCGCTGGCAA GTGCTGGGCG CCATCTCGAT GGCGCCGGAC GCCCCCAACA TCCCGCAGAT CGCCGACGCG ATGGGCATCA CGCGGCAGGC CGTGCTGAAG CAGGTCAACG TGCTGACCGA AGAAGGACTC GTGCAACCGC TGCCGAACCC GACGCACAAG CGCTCGCCGC TGTATGCGCT GACCCCGCGC GGTGCCGCGG CCTATCAGGC GGTGGTCGAG CACTGGCAAC AGCATGTCCG CGGCCTCGCC GGCCAGTTCA GTTCGACGGA TCTCGATGCG GCGATTCGCG TTCTGTCGAC GATGTCCGCC GCTCATGCGC CCGATGGGCA TGCGTGA
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Protein sequence | MTKPAKLTAV ALSVFRLNGL LIEWGNAFAA PHGLTSARWQ VLGAISMAPD APNIPQIADA MGITRQAVLK QVNVLTEEGL VQPLPNPTHK RSPLYALTPR GAAAYQAVVE HWQQHVRGLA GQFSSTDLDA AIRVLSTMSA AHAPDGHA
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