Gene BamMC406_4847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4847 
Symbol 
ID6179242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1986538 
End bp1986882 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content56% 
IMG OID641684602 
Productsmall multidrug resistance protein 
Protein accessionYP_001811513 
Protein GI172063862 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.526287 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.040677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGTCG TCTCTAGTCC GCTTGCTGCC TGGTCGATCG TTGTCGCTTC CGGTTTATTG 
GAAGTTGTCT TCTCCGTGAC GATGAAGCTC TCTGACAGCT ACTCAAAAGC ACTGCCTGGC
GGGATATCGA TCGTGGCGGC CGTACTGAGC GTGTGGCTAA TGAGTCTCAC ATTAAAAATT
CTCCCACTGG GAGACGCTTA CGCCGTATGG GCAGGAATTG GTGCGGCGGG AACGGCGTTG
GTCGGCATCG TCTGGTTCCA TGAGCCCGTC CTGCTCGGGC GGCTGTTCTG CATTGCTCTC
GTCGTCGTGG GCATCGTGGG TTTGCAACTG CAGGAAGGCA TCTAG
 
Protein sequence
MFVVSSPLAA WSIVVASGLL EVVFSVTMKL SDSYSKALPG GISIVAAVLS VWLMSLTLKI 
LPLGDAYAVW AGIGAAGTAL VGIVWFHEPV LLGRLFCIAL VVVGIVGLQL QEGI