Gene BamMC406_4835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4835 
Symbol 
ID6180135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1975561 
End bp1975974 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content61% 
IMG OID641684590 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001811501 
Protein GI172063850 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.558288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGATCGAG ACGAACTTCT CCAATATTCG CAGACCGTGT GCGACGGCCT GCGAGATGAT 
GATGACGGGC TGCGGCGGGA GGTGCTCGCA CACGCCGGAA GTCGTTGGTC GCTCGGTGTC
GTCCACACGC TCGGCGTGTA CGGCAGGCTG CGTCATGCCG AAATTGGCAA GCGCATGCAC
GGGGTGACTC AGCGCATGTT GACGCGTACG TTACGACAAC TCGAACGTGA CGGCCTGGTG
CTCCGTCACG ATTTCGAAGA AGTGCCCCCT AGAGTCGAAT ACGAGTTATC CGATACGGGC
ATGGACCTGC TCGTTCGCAT GGTCCCGCTG TGGACCTGGA TCGTCGAGAA TGCGGACCGC
TTCCGGGAAG CGAGGCGGAG TTTCGACAGC CAGCACCGCG ACGCGAACTC GTAG
 
Protein sequence
MDRDELLQYS QTVCDGLRDD DDGLRREVLA HAGSRWSLGV VHTLGVYGRL RHAEIGKRMH 
GVTQRMLTRT LRQLERDGLV LRHDFEEVPP RVEYELSDTG MDLLVRMVPL WTWIVENADR
FREARRSFDS QHRDANS