| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4832 |
|---|
| Symbol | |
|---|
| ID | 6179508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1971809 |
|---|
| End bp | 1972723 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641684587 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001811498 |
|---|
| Protein GI | 172063847 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.922561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGA AACTGATCGC AGCCATTGTC GGTTGCGCCG TGTTGGCGAC GGGTTCGATG
AAAGATGCAC AGGCGTTCGA AGGCGGCGTT TCACCGTATC CGGCCGGCGC GGTGGGGACG
AACATCGCGA ACCTGCCGCC GATCCCCGGC CTGTTTGCAC TCGAACAGTT CAACTACAGC
TTTGCGAACG GCCTCTATGG CAACGACGGC AAGAAACTGC CGATTCCGTT CCATTTGTCG
GTGTTTTCGG AAACCACGCG TCTGCTGGCC GCGTATCCGT TCCACCTACT CGGCGCAAAC
GTCTATACGC AGCTGGTCGT TCCCGTTGTG TCATTGCATA GCACCGTGTT CGGGCAGTCG
AGCACGCAGA ACGGCCTCTC CAACATCACG CTGACGCCTG TGTTGCTGCA ATGGAATCTC
TCGCCGAATC TGGCGATTGC GTCGGGCATC GACGTTGCAT TCGAGACGGG CTCCTATAGC
CCGGTCAAGT CGAGCGTCGC GGTGGGCTAC ACCTCGGTGC AGCCGGTGAT CTCGATTCGC
TACAACGTTC CCAACGGAAT CGACGTCGCG CTCGCGAACC GCTTCCTGCT CAATCTGAAG
AACGGCGCGA CGAACTACAG CTCGGGCGAC GGTTACGTCG CCGAGTTCGA CGCCGGCTGG
AACTTCGGTC CGTGGAAGCT CGGCGTGGTC GGCGCGTACC TGAACCAGTT CAGCGACGAC
AAGGCCGGCG GCGTGAGCGT GGGCAATCGC ATGCGGACTT TCGGCATCGG CCCGTCGATC
GTGTACGACG CGGGAAGCTG GAACGTCAAT CTCAATTATC AGCAAGGCAT CTATGCCGCA
AATACGGCCA AGAGCAGCAG CGTTTGGCTG AACATCGCCA TCCCGTTGTG GGCCGGCTTC
GGGCGCAAGG GCTGA
|
|---|
| Protein sequence | MSTKLIAAIV GCAVLATGSM KDAQAFEGGV SPYPAGAVGT NIANLPPIPG LFALEQFNYS
FANGLYGNDG KKLPIPFHLS VFSETTRLLA AYPFHLLGAN VYTQLVVPVV SLHSTVFGQS
STQNGLSNIT LTPVLLQWNL SPNLAIASGI DVAFETGSYS PVKSSVAVGY TSVQPVISIR
YNVPNGIDVA LANRFLLNLK NGATNYSSGD GYVAEFDAGW NFGPWKLGVV GAYLNQFSDD
KAGGVSVGNR MRTFGIGPSI VYDAGSWNVN LNYQQGIYAA NTAKSSSVWL NIAIPLWAGF
GRKG
|
|---|
| |