| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4697 |
|---|
| Symbol | |
|---|
| ID | 6180317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1817690 |
|---|
| End bp | 1818589 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641684456 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001811367 |
|---|
| Protein GI | 172063716 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.990453 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCG ATCTGAACTG GGAACGCTAC CGCACCTTCC TCGCCGTGCT GACGGAAGGC
TCGCTGTCGG GCGCGGCGCG CGCGCTCGGC ATCACGCAGC CGACGGCCGG CCGCCACGTC
GCGGCGCTCG AGGCCGCATT CGGCCAGACG CTGTTCACGC GCTCGCCGTC TGGGCTGCTG
CCGACCAAGG CGGCGCTCGC GCTGCGCGGC CATGCCGAGG CGCTGCGCAG CGCGGCGGCC
GCGTTCGAGC GGGCAGCGGC GAGCCACGGC GCGGGCGTGC GCGGCACCGT TCGGATCTCG
GCCAGCGACG TGATCGCGGT CGAGGTGCTG CCGCCGATGC TCGCGCAATT GCGGCGCGAC
CATCCGGGCC TCGTGATCGA GCTGGTGCCG ACCGACCGCA TCCAGGACGT ACTGAACCGG
GAGGTCGACA TCGCGGTGCG GATGGCGCCG CCCGCGCAGG ACGCGCTCGT CGCGCGGCGC
GTCGGCGAGA TCGACATCGG GCTGTATGCG CGCGACGACT ACCTGGCGCG CAACGGCACA
CCGTCGACCA CCGGCGAACT CGCCCATCAC GCGCTGATCG GTTTCGATAC GGTCACGCCG
TTCATCCGCT CGGCCGGGCG CGGGATGCCG TCGTGGAAGC GCGATGCGTT CGCGCTGCGT
ACCGACAGCA ATCTCGCGCA ACTCGCGATG ATTCGCGCGG GCTACGGGAT CGGTTTCTGC
CAGAACGGGC TCGCGAAACG CGATGCGCGG CTCGTGCGCG TGCTGCCGGA CGGGCCCACG
ATGAAACTGG AAACCTGGGT GGTCATGCAC GAGGATCTGC GCACGAGCCC GCGTTGCCGG
GCCGTGTTCG ATGCGCTGGC GAACGGGCTG CGCGCGTATG CCGACGGGAC GGCCGACTAG
|
|---|
| Protein sequence | MTIDLNWERY RTFLAVLTEG SLSGAARALG ITQPTAGRHV AALEAAFGQT LFTRSPSGLL
PTKAALALRG HAEALRSAAA AFERAAASHG AGVRGTVRIS ASDVIAVEVL PPMLAQLRRD
HPGLVIELVP TDRIQDVLNR EVDIAVRMAP PAQDALVARR VGEIDIGLYA RDDYLARNGT
PSTTGELAHH ALIGFDTVTP FIRSAGRGMP SWKRDAFALR TDSNLAQLAM IRAGYGIGFC
QNGLAKRDAR LVRVLPDGPT MKLETWVVMH EDLRTSPRCR AVFDALANGL RAYADGTAD
|
|---|
| |