| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4669 |
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| Symbol | |
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| ID | 6181289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1785719 |
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| End bp | 1786918 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684428 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001811339 |
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| Protein GI | 172063688 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.287204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCA ATCCAGGATT GAAGCGCATC GCGCTACCGG CCGTGCTGGC CGCCGTTCCG
CTGGCCGCGC TGCTCGCGTT ATCCGGCTGC AAGTCGGACG ACACCGCACC AGCCGCGACG
CCGAGCGTGA TCGTCAGCCC GCCCGTCGCC CGCGACGTCA ACGATGTCGA CGTCTATACG
GGCCGCTTCG AAGCCGTCGA CACGGTCGAC GTGCGCCCGC GCGTGAGCGG CTATCTCGAC
AAGATCGCAT TCCAGGACGG CGCGACCGTC CGCAAAGGCG ACTTGCTGTT CGTCATCGAT
CCGCGCCCGT ACCAGGCGGC CGTCACCGCT GCACAGGGCG CGCTCGAACG CGCGCAGTCG
CAACTGAAGC TGAGCCGGCA GGATTTCGAG CGCGCGAGCA TCCTGATCAA GACCGACACC
ATCGCGCAGA GCCTCTACGA CCAGCGCAGA CAGGCCGTGC AAAGCGCACA GGCCGAGGTG
ACGAGCGCGC AAGGCGCGCT CGAACGCGCG CGGCTCGACT TGTCGTTCAC GCGCATCGTC
GCGCCGATGT CCGGCCGCAT CAGCCGCAAG CTCGTGAGCG AGGGCAATCT CGTGAAAGGC
GGCGACAGCG ATGCGACCGT GCTGACGACG ATCGTGTCGC AGGATCCGAT CGACATCTAC
TTCGACGTCG ACGAGGAAAG CTACCTGCGC TATACGCGCG AATCGCAGAA AAGCGGCGGC
AACGCGTCGT CGCGGCAGGT TGCGATCGCG CTGCCGGGCG ATACGCAGCC ATCGCTGACG
GGCACGATGG ATTTCGTCGA CAACCGCCTC GACAACTCGA CGGGCACGTT GCGGCAGCGC
GCGCGCGTCG CGAATCCTGA CCGGCGCCTG AGCCCCGGTC AGTTCGGCCG CGTGTCTCTG
TCGAGCCGCG TCGCGCATCA CGCGCTGCTT GTTCCCGATT CGGCCGTCGC AACCGACGCG
ACACGCCGCG TGCTGTATTT CGTCGACGCG AACAGCGTCG TCGCGATCCG CCCGGTGACG
CCCGGCCGCC TGTACGGCAA CCTGCGCGAG ATCGACGCGG GGCTGAATGC GGGCGACCGC
GTGATCGTCG ACGGCTTCCA GCGCGTGCAG GCCGGCGACA AGGTCAAGGT CGTTCCGCGC
GCGATCGCGA CGGCCGATGC CGCCGGCCCT GCAACCGTTA CGACAGGGAG CGCGCAATGA
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| Protein sequence | MNRNPGLKRI ALPAVLAAVP LAALLALSGC KSDDTAPAAT PSVIVSPPVA RDVNDVDVYT
GRFEAVDTVD VRPRVSGYLD KIAFQDGATV RKGDLLFVID PRPYQAAVTA AQGALERAQS
QLKLSRQDFE RASILIKTDT IAQSLYDQRR QAVQSAQAEV TSAQGALERA RLDLSFTRIV
APMSGRISRK LVSEGNLVKG GDSDATVLTT IVSQDPIDIY FDVDEESYLR YTRESQKSGG
NASSRQVAIA LPGDTQPSLT GTMDFVDNRL DNSTGTLRQR ARVANPDRRL SPGQFGRVSL
SSRVAHHALL VPDSAVATDA TRRVLYFVDA NSVVAIRPVT PGRLYGNLRE IDAGLNAGDR
VIVDGFQRVQ AGDKVKVVPR AIATADAAGP ATVTTGSAQ
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