| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4617 |
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| Symbol | |
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| ID | 6181390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1725525 |
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| End bp | 1726685 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641684376 |
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| Product | formate dehydrogenase |
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| Protein accession | YP_001811287 |
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| Protein GI | 172063636 |
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| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAAG TTCTCTGCGT GCTCTACCCG GATCCGACGT CCGGCTATCC GCCCCGGTAC
GTACGTGATG GAATCCCGGC GATCGCGGCA TATCCCGGCG GACAGCGCTT GCCTTCCCCG
CAAGGTACGC TGGGTTTCGC GCCGGGCGAA CTCGTCGGGT GCGTGTCGGG GGAGCTCGGC
CTGCGGCCCT ATCTGGAAGC AAACGGTCAC GAACTAATCG TGACGAGCGA CAAGGACGGA
CCCGATTCCG CGTTCGAGCG GCACCTGCCC GACGCGGACG TGGTGATTTC GCAACCGTTC
TGGCCGGCCT ATCTGACGAG GGAGCGAATC GCGAAAGCAC GCAAGCTCAA ACTCGCGCTC
ACCGCTGGGA TCGGTTCGGA CCATGTCGAT CTCCAGGCTG CGGCGGAGCG CGGCATTACC
GTCGCGGAAG AAACGTTTTC GAACAGCATC AGCGTCGCGG AACACGTGGT CATGACGGTG
CTGGCGCTGG TCCGGAATTT CGTTCCCGCT CATCAGTTCG CGACCAACAA CGGCTGGAAC
ATCGCCGATT GCGTGAGCCG AAGCTACGAT CTCGAAGGCA TGCATTTCGG AACGATCGGG
GCAGGTCGCA TCGGGCTGGC CGTGCTGCGG CGGCTGAAAC CGTTTGACGT ACATCTTCAT
TACCACAGTC GTCATCGCCT GTCGGCCGAC CTTGAACGCG AACTCGGCCT CTCTTACCAC
GCCACCGCCA GATCTCTCGT CGAGGTCAGC GATGTGATAA ACCTGCAATG CCCGCTTTAT
CCGTCCACCG AACATATATT CGACGACGAA ATGTTCAGCC ACGTGAAGCC CGGCGCCTAT
CTCATCAATA CCGCGCGCGG CAAGCTGTGC GATAGAGACG CGGTCGTGCG AGCGCTCGAA
TCCGGTCGCC TGGCAGGCTA TGGCGGCGAC GTGTGGTTTC CGCAACCCGC GCCGCCGGAC
CATCCGTGGC GCCACATGTC GAGCGAAGCA ATGACGCCGC ATATCTCGGG CACGTCGCTG
TCCGCGCAGG CTCGCTATGC GGCAGGCACC CTCGAGATCC TGCAGTGCCA TCTCGAGGGT
CGGCCGATTC GTCCCGAGTA CCTTATCGTC GACGCCGGAA AACTCGCCGG GGTCGGTGCC
GCGTCGTACA AGTTGAGCTG A
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| Protein sequence | MAKVLCVLYP DPTSGYPPRY VRDGIPAIAA YPGGQRLPSP QGTLGFAPGE LVGCVSGELG
LRPYLEANGH ELIVTSDKDG PDSAFERHLP DADVVISQPF WPAYLTRERI AKARKLKLAL
TAGIGSDHVD LQAAAERGIT VAEETFSNSI SVAEHVVMTV LALVRNFVPA HQFATNNGWN
IADCVSRSYD LEGMHFGTIG AGRIGLAVLR RLKPFDVHLH YHSRHRLSAD LERELGLSYH
ATARSLVEVS DVINLQCPLY PSTEHIFDDE MFSHVKPGAY LINTARGKLC DRDAVVRALE
SGRLAGYGGD VWFPQPAPPD HPWRHMSSEA MTPHISGTSL SAQARYAAGT LEILQCHLEG
RPIRPEYLIV DAGKLAGVGA ASYKLS
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