Gene BamMC406_4614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4614 
Symbol 
ID6179601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1718169 
End bp1718726 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content71% 
IMG OID641684373 
Productphage integrase 
Protein accessionYP_001811284 
Protein GI172063633 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCGA CGCTGGGCGA CATCGCGGCC GATGCCCGGG GCATGTTGTG GCTCGAGGTG 
ACCGGCAAAG GCGCGAAGCC CGGACGCGTA GCGCTGCCGC CGCTCGCGCG CGATGCATTG
CGGCGCGCGC TGAAGGCGCG GGGTCTGCCG GTCAGGCGTA CCCGCTGGCA TCCGGCCACG
CCGTTGGTGG CGGCCCTCGA CACCGAACGA AGCGCAGCCC AGCCAGCCGG AGCCGGCATC
AGCGCGGCAC GCCTGCGGCA GGTGCTCGGG GGATTTTTCC AGGCGGCGGC GGAAAGCGTG
GACGCGCGCC ATCCAACCCT TGCCGCGAAG CTACGGCACG CCAGCCCCCA CTGGCTACGT
CACACACATG CAACCCACGC GCTGGACGCC GGCGTCGAAC TGGTCGTCGT GTGTGACAAC
TTGCGCAACG CGTCAGTGGC CACCACCTCG ACCTATCTCC ATGGGGAAGA GGCGAAACGC
GCGCGACAAG TCGGCGCAGC CTTCCGGCGT CCGCAGCGTG GATCGTGTCG CCAGTACCTT
CCCCGCCCGG CCCGGTAG
 
Protein sequence
MAATLGDIAA DARGMLWLEV TGKGAKPGRV ALPPLARDAL RRALKARGLP VRRTRWHPAT 
PLVAALDTER SAAQPAGAGI SAARLRQVLG GFFQAAAESV DARHPTLAAK LRHASPHWLR
HTHATHALDA GVELVVVCDN LRNASVATTS TYLHGEEAKR ARQVGAAFRR PQRGSCRQYL
PRPAR