Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4614 |
Symbol | |
ID | 6179601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1718169 |
End bp | 1718726 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641684373 |
Product | phage integrase |
Protein accession | YP_001811284 |
Protein GI | 172063633 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGCGA CGCTGGGCGA CATCGCGGCC GATGCCCGGG GCATGTTGTG GCTCGAGGTG ACCGGCAAAG GCGCGAAGCC CGGACGCGTA GCGCTGCCGC CGCTCGCGCG CGATGCATTG CGGCGCGCGC TGAAGGCGCG GGGTCTGCCG GTCAGGCGTA CCCGCTGGCA TCCGGCCACG CCGTTGGTGG CGGCCCTCGA CACCGAACGA AGCGCAGCCC AGCCAGCCGG AGCCGGCATC AGCGCGGCAC GCCTGCGGCA GGTGCTCGGG GGATTTTTCC AGGCGGCGGC GGAAAGCGTG GACGCGCGCC ATCCAACCCT TGCCGCGAAG CTACGGCACG CCAGCCCCCA CTGGCTACGT CACACACATG CAACCCACGC GCTGGACGCC GGCGTCGAAC TGGTCGTCGT GTGTGACAAC TTGCGCAACG CGTCAGTGGC CACCACCTCG ACCTATCTCC ATGGGGAAGA GGCGAAACGC GCGCGACAAG TCGGCGCAGC CTTCCGGCGT CCGCAGCGTG GATCGTGTCG CCAGTACCTT CCCCGCCCGG CCCGGTAG
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Protein sequence | MAATLGDIAA DARGMLWLEV TGKGAKPGRV ALPPLARDAL RRALKARGLP VRRTRWHPAT PLVAALDTER SAAQPAGAGI SAARLRQVLG GFFQAAAESV DARHPTLAAK LRHASPHWLR HTHATHALDA GVELVVVCDN LRNASVATTS TYLHGEEAKR ARQVGAAFRR PQRGSCRQYL PRPAR
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