| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4596 |
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| Symbol | |
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| ID | 6180454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1700794 |
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| End bp | 1701705 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641684356 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001811267 |
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| Protein GI | 172063616 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00651674 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCGATT TGCGCCAGTT CCGGCAATTC ATTGCCGTCG CCGAAACGCT CAGCTTCCGG
CGCGCCGCCG AGCGCCTGCA CATGGCGCAG CCGCCGCTCA GCGCGGCCAT CCGCAAGCTC
GAGGAACAGT TGGGCGTCGC GCTGTTCGAA CGCGACAACC GCGGCGCGAC GCTCACGCCG
GCCGGCGATG CCTTCCTGCT CGAAGCGCGC CGCGCGCTCG AGCAGGCCGA GCGGGCGGTG
GCCGTGGCGC GACGCGCGGG CGCCGGCCTG GGCGGCACGC TGCGGCTGCG GTTCGTCGAC
AGCACGGTCA ACGCGCTGCT GCCGCTGATC CTCCGCGCGT TCCAGGAACG GCATCCGGAC
GTCGATTTCC AGCTGGAAGA AGGCACGACC GCCGAGCAGG TGCTCGCGCT GCGGCAGGAC
CGCACGGACG TCGGCCTCGT CGTGCTGCCG GTGGCCGATG CCGGCGACGT GCACGTCGAG
CCGCTGCTGC GCGACCGGAT GGTCGCCGCG CTGCCCGACG GCCACCAGCT CGCGCGCCGC
CGCCGCATCG CGCTGGCCGA GCTGGCGGAC GAACCTTGGG TGCTGTTTGC CGCGCATCAC
GGGCCAGGCA TGCATGCGCG GATCGTGACG GCGTGCGCGC AGGCCGGCTT CGCGCCGCGC
GTGGTCCAGC AGCCGCGCCA GATGCAGACG ACGGCCGGAC TCGTCGCGGG CGGCATCGGT
GTCGCGCTGA TGCCGCGGCT ATTCGTGCCG ATGCAGCCGC AAGGCATTAC GTTCTGCGAA
CTGACGGGCG CGGGCAGCCC GCTCGCGTAC GAACTGGCGA TCGCGTACCG GACACCGTCG
CCGCTCGTCG ACGCGCTGCG CGACACCGCG CGGCACGCGG TTGGCACGCT GGGGCTGGTG
ACCGCGACGT GA
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| Protein sequence | MIDLRQFRQF IAVAETLSFR RAAERLHMAQ PPLSAAIRKL EEQLGVALFE RDNRGATLTP
AGDAFLLEAR RALEQAERAV AVARRAGAGL GGTLRLRFVD STVNALLPLI LRAFQERHPD
VDFQLEEGTT AEQVLALRQD RTDVGLVVLP VADAGDVHVE PLLRDRMVAA LPDGHQLARR
RRIALAELAD EPWVLFAAHH GPGMHARIVT ACAQAGFAPR VVQQPRQMQT TAGLVAGGIG
VALMPRLFVP MQPQGITFCE LTGAGSPLAY ELAIAYRTPS PLVDALRDTA RHAVGTLGLV
TAT
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