| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4577 |
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| Symbol | |
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| ID | 6180714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1682740 |
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| End bp | 1683789 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684338 |
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| Product | multidrug resistance protein MdtN |
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| Protein accession | YP_001811249 |
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| Protein GI | 172063598 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.603811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000103156 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGCCG CCGGCATCAC CCGCCCGTCC ATGAAAGGCC GCGTGATCGC GCTGGCGATC
GTCGCGCTCG GCATCGCCGC GCTCGCGTAC GCGTACCACC GCACGTCGGC CTACCCGTCC
ACCGACGACG CGTCGATCGA CGCGGACCTC GTCCACGTCG CGTCGCCCGT CGGCGGCCGC
ATCGTGCGGC TCGCCGTGCA CGAGAACCAG CGCGTCGCGA AAGGCGACCT GCTGTATGAA
ATCGATCCGG TGCCGTACCG GCTGACGGTC GCGCAGGCGC AGGCCGATGT CGAGCTCGCG
CGCGCATCGC TCGACACGCG CCGCCGGTCG CTGATCGGCG AGCATTCGAA CGCCGCGGTC
GCCGCGGAGC AGGTCAAGCG CGCGACGCAG AATTACGATC TCGCGACGCG CGACGTGAAC
CGGCTCGCGC CGCTCGCCGC GCAGGGCTAC GTGAGCGCGC AGCAGTTCGA CCAGGCGAAA
GTGCGGCAGC GCGATGCGGC CGTGTCGCTC GCGCAGGCCA AGGAACAGCA GCGATCGTCC
GCGCAGACGA TCGGCGACGA TGCCGACGCG ATCGCGACGC TCCATGCGCG CGAAGCCGCC
CTCGCCCGCG CGCAGCACGC GCTCGACGAT ACGGTCGTGC GCGCGCCGCA CGACGGGCTC
GTGACGGGGC TGACCGTGCT CGCCGGCGAA ACCCTCGCGC CGAACCAGTC GATCTTCACG
CTGATCGACG CAAGCGAATG GTTCGCGGTC GGCAATTTCC GCGAGACGTC GCTGAATCGC
ATCGCGGTCG GCGATTGCGC GACCGTCTAT TCGATGATCG ACCGCAGCCG CGCGCTGACA
GGCAAGGTGG TCGGCATCGG CGCGGGCATC GCGGACAGCG ATCGCATCAA CCTGCCGCGC
GCGCTGCCGA TCGTGCAGCG TTCGGTGAAC TGGGTGCATG TCGCGCAGCG CTTCCCCGTG
CGCGTGAAGC TCGACGAACC CGACGGCAAG CTCGTGCGTG TCGGCGCGAG CGCGATCGTC
GAGGTCCGGC ATGGCTCGGC CTGCCGCTGA
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| Protein sequence | MKAAGITRPS MKGRVIALAI VALGIAALAY AYHRTSAYPS TDDASIDADL VHVASPVGGR
IVRLAVHENQ RVAKGDLLYE IDPVPYRLTV AQAQADVELA RASLDTRRRS LIGEHSNAAV
AAEQVKRATQ NYDLATRDVN RLAPLAAQGY VSAQQFDQAK VRQRDAAVSL AQAKEQQRSS
AQTIGDDADA IATLHAREAA LARAQHALDD TVVRAPHDGL VTGLTVLAGE TLAPNQSIFT
LIDASEWFAV GNFRETSLNR IAVGDCATVY SMIDRSRALT GKVVGIGAGI ADSDRINLPR
ALPIVQRSVN WVHVAQRFPV RVKLDEPDGK LVRVGASAIV EVRHGSACR
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