| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4562 |
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| Symbol | |
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| ID | 6179265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1669231 |
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| End bp | 1670898 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684323 |
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| Product | hypothetical protein |
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| Protein accession | YP_001811234 |
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| Protein GI | 172063583 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.167245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00212145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAAAA AAACCACGGT TGGCGAGCTG ATTGCCGCCT TTCTCGAGCA GTGCGACGTC
AAGACCGCAT TCGGTGTCAT CTCGATCCAC AACATGCCGA TCCTCGACGC GATCAACTCG
CGCGGCAACA TCCGGTATGT CGGCGCGCGC GGTGAAGCGG GCGCGGTGAA CATGGCCGAC
GGCCTGGCCC GCGTGTCGGG CGGCCTCGGC GTCGCGTTCA CGAGCACCGG CACGGCGGCG
GGCAACGCGG CCGGCGCGAT GGTCGAGGCA CTGACGGCAG GCACCGCGCT GCTGCACATC
ACGGGGCAGA TCGAGACGCC GTACCTCGAC CGGGACCTGG CCTACATCCA CGAAGCGCCG
GACCAGCTGA CGATGCTCGA TGCGATCTCG AAGGCCGCGT TCCGCGTGCG TACCGTCGAA
ACCGTGCTGC CGACGATCCG CGAAGCGGTG CGTATCGCGC AGACCGCGCC GACGGGCCCG
GTGTCGGTCG AGATTCCGAT CGACATCCAG GCCGCCGAAA TCGAATGGCC GGAAGACCTC
GCGCCGGCGC ACGTCGCGGT GCGCGAGCAC GACGACGCAC GCGTCGCGAA GCTCGCCGAC
GCGCTGGCGG CCAAGCGCCG TCCGCTGCTG TGGCTCGGCG GCGGTGCGCG CCACGCGCGG
GCGGAAGTCG AACGCCTGGT GAAGCTCGGC TTTGGTGTCG TGACGAGCGT GCAGGGCCGC
GGCGTGCTGC CGGAAGATCA CCCGGCGACG CTCGGCGCGT TCAACGTGCA TGCGTCCGTC
GAGGCGTTCT ACAAGACCTG CGATGCGCTC GTCGTGGTCG GCTCGCGCCT GCGCGGCAAC
GAGACGCTGA AATACAAGCT CGCGCTGCCG CAGCCGCTGT TCCGCGTCGA CGCCGATGCG
CTCGCCGACA ACCGCGGCTA TCGCAACGAG CTGTTCGTGC ACGGCGATTC GAAGCGCGTG
CTGGCCGAAC TGGCCGATCG CCTCGAAGGC CGCCTGTCCG TCGATCCGCA GTTCGCGCTC
GATCTCGCGG CGGCGCGCGA GCAGGCCGTC GCCAGCGTGG CGGAAGGCCT TGGGCCCTAC
AAGAAGCTCG TCGACACGCT GCAAGCGGCG GTCGGCCGCG ACTACAACTG GGTGCGCGAC
GTGACGATCT CGAACAGCAC GTGGGGCAAC CGCCTGCTGA AGATCTTCGA GCCGCGCGCG
GGCGTGCATG CGCTCGGCGG CGGCATCGGC CAGGGCATCC AGATGGGGAT CGGCGCGGCG
CTGGCCGGCT CGGCCGCGAA GACGGTCTGC CTGGTCGGCG ACGGCGGCCT GATGGTCAAC
GTCGGCGAGC TCGTGACGGC CGTGCAGGAA AACGCGAACG TGATGATCGT GCTGATGAAC
GACCAGTGCT ACGGCGTGAT CCGCAACATC CAGGACGCGC AGTACGGCGG CCGCCGCTGC
TTCGTGCAGC TGCACCAGCC CGATTTCGCG CAGTTCTGCG CGAGCTTCGG CCTCACGCAC
TACCGGATCA CGTCGCTCGA CCAGGCCGAA GCGATCGTGC GCGAAGGGAT CGCGAAGGAA
GGGCCCGTGA TGGTCGAGGT CGACATGCTG TCGGTCGGCG CGTTCGCATC GAACTTCGCG
GGCCCGCCGG TGAAGAAGGA AGAGCCGTCG GAGCGGCAAT ATGCGTAA
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| Protein sequence | MSKKTTVGEL IAAFLEQCDV KTAFGVISIH NMPILDAINS RGNIRYVGAR GEAGAVNMAD
GLARVSGGLG VAFTSTGTAA GNAAGAMVEA LTAGTALLHI TGQIETPYLD RDLAYIHEAP
DQLTMLDAIS KAAFRVRTVE TVLPTIREAV RIAQTAPTGP VSVEIPIDIQ AAEIEWPEDL
APAHVAVREH DDARVAKLAD ALAAKRRPLL WLGGGARHAR AEVERLVKLG FGVVTSVQGR
GVLPEDHPAT LGAFNVHASV EAFYKTCDAL VVVGSRLRGN ETLKYKLALP QPLFRVDADA
LADNRGYRNE LFVHGDSKRV LAELADRLEG RLSVDPQFAL DLAAAREQAV ASVAEGLGPY
KKLVDTLQAA VGRDYNWVRD VTISNSTWGN RLLKIFEPRA GVHALGGGIG QGIQMGIGAA
LAGSAAKTVC LVGDGGLMVN VGELVTAVQE NANVMIVLMN DQCYGVIRNI QDAQYGGRRC
FVQLHQPDFA QFCASFGLTH YRITSLDQAE AIVREGIAKE GPVMVEVDML SVGAFASNFA
GPPVKKEEPS ERQYA
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