| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4465 |
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| Symbol | |
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| ID | 6179220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1560747 |
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| End bp | 1562204 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684226 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001811137 |
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| Protein GI | 172063486 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.090141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA CGCGCACTCG GCCGGCGCCG GTTCATGCGT CCGGCCGGCT CGATCCGGCG
ATCTGGAAAG TCAGCGCGGT CGCGACGCTC GGCGGGCTGC TGTCGCAGCT CGACGCGACG
ATCGTCAACG TATCGCTGTC GAGTCTCGCG ACCGACCTGC ACGCGAGCCT GTCGACGATC
CAGTGGGTGA CGAGCGGCTA CCTGCTCGCG CTCACGCTGG TGTTGCCGCT GAACGGTTGG
CTCGTCGACC GCATCGGTGC GAAGGCGCTG TACCTGTGGT GTTTCTCCGC GTTCACGCTG
ACGTCGGCGC TGTGCGGGCT CGCGTGGTCC GCACCGTCGC TGATCGCGTT CCGTGTGCTG
CAAGGCATCA GCGGCGGGCT GCTCGCGCCG ATGGCGCAGA TGATGATCGC GCGCGTGGCC
GGCCAGCAGA TGGCACGCGT GATCGGTTAT GCGGCGGTGC CCGTGCTGAT CGCGCCGATC
CTCGGCCCGG TCGTCGCCGG CGCGATCCTG CAGCACGCGT CGTGGCGCTG GCTCTTTCTC
GTGAACCTGC CGGTCGGCGC GCTCGCGCTT GCGCTGGCCG TGTGGTTCCT GCCCGGCGAT
CGCGACGAAA CGCAGCGGCG CGAACTCGAC TGGGTCGGCC TCGCGTTGCT GTCGCCCGCG
CTCGTGCTGT TCCTGTACGG CGCGGAGCGG ATCGACACCG CGCCGGGTAT CGCGGCAATC
GCGGGTTCGG TGCTGCTGCT CGCGGCGTTC CTGCGCGTCG AGCGACGCAA AGGCGAGCGT
GCGCTGATCG ACGTCGCGCT GTTTCGCGCG CGCGTGTTCG GCGCGGCCGC CGCCACGCAG
TTTCTGTCGA ACGGGGCGAT CTACGCAGGC CAGATGCTGA TTCCGGTATT CCTGATCCAG
GCGTGCGGCC GCTCGCCCGG CGAGATGGGC TGGCTGCTGG CCCCGCTCGG GCTCGGCATG
CTCGTCACGT ATCCGTTGAT GGGCGCGCTG ACGAGCCGGT TCGGCGTGCG CCGACTGGCC
GCCGCGGGCG CGATGCTCGC GCTCGTCGCG ACGCTGCCGA TCGTGTATCT CGCGCTGACC
GGCTACGATC CCTACGTGCT GGTGCCCGCG CTGTTCGTGC GCGGGATGGG CCAGAGCGCG
ATCGGCATCC CGTCGATGTC CGCCGCGTAT GCGTCGGTCG AACGGCGCAA TCTGCCGATG
GCGACGACGT CGCTCAATAT CGTCCAGCGC CTCGGCGGCC CGACGTTCAC GACGCTCTGC
ACGCTGTTTC TCGCATGGCG GCTGCAGGCC GAATCGGTGT CGACGGGCGG CGCGCATGGG
GTCGCCTACG CGTGGGCGTT CGGCCTGCTT TGCGCGCTGC ATGCGGCGAG CTTCGTGACG
ACGCTGCGGC TGCCGCGATG GTCGAGCGGC GCGGGCGCAC GGCCGACGGG GGTGCGCGGG
TCGGTGCGCG CTGAGTGA
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| Protein sequence | MNDTRTRPAP VHASGRLDPA IWKVSAVATL GGLLSQLDAT IVNVSLSSLA TDLHASLSTI
QWVTSGYLLA LTLVLPLNGW LVDRIGAKAL YLWCFSAFTL TSALCGLAWS APSLIAFRVL
QGISGGLLAP MAQMMIARVA GQQMARVIGY AAVPVLIAPI LGPVVAGAIL QHASWRWLFL
VNLPVGALAL ALAVWFLPGD RDETQRRELD WVGLALLSPA LVLFLYGAER IDTAPGIAAI
AGSVLLLAAF LRVERRKGER ALIDVALFRA RVFGAAAATQ FLSNGAIYAG QMLIPVFLIQ
ACGRSPGEMG WLLAPLGLGM LVTYPLMGAL TSRFGVRRLA AAGAMLALVA TLPIVYLALT
GYDPYVLVPA LFVRGMGQSA IGIPSMSAAY ASVERRNLPM ATTSLNIVQR LGGPTFTTLC
TLFLAWRLQA ESVSTGGAHG VAYAWAFGLL CALHAASFVT TLRLPRWSSG AGARPTGVRG
SVRAE
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