| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4453 |
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| Symbol | |
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| ID | 6181184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1546461 |
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| End bp | 1547963 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684214 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001811125 |
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| Protein GI | 172063474 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.177151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTCG ATTGGCACTA TGCGTTTCAG CTCTTGTGGG ACAAGGATTT CTGGCGCGCC
TGCGTCGTGG TCGTCGAACT CAGCGTCGTC GCATGGCTGC TCGGCGTGTT GCTCGGGTTT
CCGGTGGCGC TCGCGAGACA GTCGCACCGG CCGCTGCTGA AGCGCGCGGC GGCCGTCTAC
ATCTGGTTCT TCCGCAGCCT GCCGCTGCTC GTGCTGCTGG TCTTCATCTA CAACCTGCCG
CAGGTCTTTC CCGCAACCAG CGCGGTGCTG TCCGATCCGT TCACGGCCGG CCTGATCGCG
ATGGTGCTGA GCGAGACCGC GTATTTCGCG GAAATCCATC GCGGCGGGAT CCTGTCGGTG
CCGCGCGGGC AGCTCGAGGC CGGCCGCGCT CTGGGTATCC GCTTCGCCGG CATCCAGCGG
TTGATCGTGA TGCCGCAGGC GATCCGCATC GCGCTGCCCG CGCTCGCGAA CGAGTTCATC
ACGATCGTGA AGCTCACGTC GCTGGTGTCG GTGATTTCGC TGGCCGAGAT TCTGCTCGTC
GGACAGCGGC TGTACACGCA GAATTTTCTC GTGTTCGAAA CGATGCTGGC CGTGGCGTTC
TACTACGTGT TGATCGTGAC CGTGTTCAGC CGGCTGCTCG GCTATCTCGA GCGGCACCTC
GACGTCAGTC GGCGCACGCC CGTCCAGGCC GACGAGATCG ATCTCGCGCT GCCGCCGTCG
GCGCCGGCCG TCGCGCCGAG GCAGCGGGCG AATGCCGAAT TCGCGCTTCG CCTGAAAGGC
GTGCAGCAGC GCTACGGCCG CCACGAAGTG TTGAAGGACA TTCATCTCGA CGTCGTGCCG
GGGCAGGTCG TGTCGATCAT CGGCCCGTCC GGCTCGGGCA AGACGTCGCT GATCCGCACC
ATCAACGGGC TCGCGCCGGT GAACGCGGGC GAGATCGACC TGTACGGCGA GCCGTTCATC
CGCGCGTCGG GTTCGCATCC GCCGCGCGTG TCGCACGAGC GCATCCTCGA TATCGGCATG
GTGTTCCAGA GCTTCAACCT GTTCCCGCAC CGCACCGCGC TGCAGAACGT GATGATGGCG
CCGTGCTATC ACCGGCAGGC CGATGCGGCG GCGATCCGGC TGCAGGCGCT GTCGCTGCTC
TCGAAGGTCG GCATGCTCGA GCATGCGAAC AAGTATCCGC ACCAGCTTTC CGGCGGCCAG
CAGCAGCGTG TCGCGATCGC GCGCGCACTC GCGACGCGGC CGTCGATCAT GCTGTTCGAC
GAGCCGACGT CGGCGCTCGA TCCCGAGCTC GTCGGCGAAG TGCTGAAGGT TGTCGAGACG
CTGGCGAAGG AAGGGATGAC GATGATCATC GTGACGCACG AAATGAACTT CGCGTTCAAG
GTCTCCGACC GGATCGTGTT CATGGAGAGC GGGCGCATCC TGTACGACGT GCCGCCGGAG
CGGATTCGCG CCAGCGGCGA CGCGCGCGTG AAGGATTTTC TGAAACACGT TCACATCGCA
TGA
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| Protein sequence | MQFDWHYAFQ LLWDKDFWRA CVVVVELSVV AWLLGVLLGF PVALARQSHR PLLKRAAAVY
IWFFRSLPLL VLLVFIYNLP QVFPATSAVL SDPFTAGLIA MVLSETAYFA EIHRGGILSV
PRGQLEAGRA LGIRFAGIQR LIVMPQAIRI ALPALANEFI TIVKLTSLVS VISLAEILLV
GQRLYTQNFL VFETMLAVAF YYVLIVTVFS RLLGYLERHL DVSRRTPVQA DEIDLALPPS
APAVAPRQRA NAEFALRLKG VQQRYGRHEV LKDIHLDVVP GQVVSIIGPS GSGKTSLIRT
INGLAPVNAG EIDLYGEPFI RASGSHPPRV SHERILDIGM VFQSFNLFPH RTALQNVMMA
PCYHRQADAA AIRLQALSLL SKVGMLEHAN KYPHQLSGGQ QQRVAIARAL ATRPSIMLFD
EPTSALDPEL VGEVLKVVET LAKEGMTMII VTHEMNFAFK VSDRIVFMES GRILYDVPPE
RIRASGDARV KDFLKHVHIA
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