Gene BamMC406_4444 details

Gene Information

• Locus tag: BamMC406_4444
• ID: 6179658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria MC40-6
• Kingdom: Bacteria
• Replicon accession: NC_010552
• Strand: +
• Start bp: 1531314
• End bp: 1537355
• Gene Length: 6042 bp
• Protein Length: 2013 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 641684205
• Product: alpha-2-macroglobulin domain-containing protein
• Protein accession: YP_001811116
• Protein GI: 172063465
• COG category: [R] General function prediction only
• COG ID: [COG2373] Large extracellular alpha-helical protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGCAGC ACGATAAACA CAACAACACG CATCAATCCA ATCACACCAC ACGGCTGCTC 
TGGCGCATCG GCGCGATCGC GGCGCTCGGC GCCGCCGCGG CACTGTCGCT GCATGCGCTC 
GCGGCGCGCA CGGTGAGCGT GTCGCCGCAA GGCACGGTCA CCGAAGTCCG GCAAAGCGTC 
GTCAAGTTCG ACGAGCCGAT GGTCGCGTTC GGCTCGGCAT CCGCGCCGAA CCCCGCCCGC 
ATGACCTGCA ACGATTCCAC CGCCGCGCGC GGCCAGGGTC ACTGGCTCGA CGACAAGACG 
TGGGTCTACG ATTTCGAGAA CGACCTGCCG CCGGGCGTGC GCTGCTCGGT CGCGCTCAAC 
GACACGCTGC GCTCGGTCGC CGGCAATGCG GTGAGCGGCC CGCGCCGCTT CACGTTCCAG 
ACCGGCGGCC CGTTCCCGGT GACGGTACGC CCCGGCTCGC GCGAGATCGA GGAGCGCCAG 
GTCTTCGTGC TGAAGCTGAA CGGCCCGGCC GAGCCGCGTT CCGCGCTCGC GAACATCTGG 
TGCGAGGCGG CCGGCATCGG CAACCGCATT CCCGTCACGG CCACCGACGA CGCTACCCGC 
AACGCGCTGC TCGACCACTT CGGGCTGAAG AAGGACGCCG CGCGCGTGCT GACGCTGTCG 
TGTGCGCAGG CGCTGCCCGC GAGCGCGAAG ATGCAGCTCG TCTACGGCAA GGGCGTCGCG 
AGCCCGAGCG GCATCGCGAA CGACACCGAG CGCCGCTTCG ACTTCACGGT GCGCGCCCCT 
TTCACCGCGA GCTTCTCGTG CGAACGCGAG AACGCGAAGG CGCCCTGCAC GCCGCTGCGC 
CCGCTGACGC TGTCGTTCAA TGCGCCGATC TCGCGCAAGA ACGCCGAGGC GATCAAGCTG 
CGCGGTCCTG ACGGTTCGCT TTCGCCGACC TTCGGAGCCG ACGACCACAG CGACGAAGTG 
ACCACCGTCA CGTTCAACCC GCCGCTGCCC GCGCAGGCGA ACCTGACGAT CGAGCTGCCG 
TCCGGGCTGC GCGACGTGAC CGACCGCGCG CTCGCGAACA CCGACTTGTT CCCGCTCGCG 
ACGCGCACCG CGCCGATGCC ACCGCTCGCG AAATTCTCGT CGGGCACCTT CGGAATCGTC 
GAGCGTTTCG CCGAACCCGA TACGCCGGCG CTCGTGCCCG TCACGCTGCG CAACGTGGAG 
GCCGACCTGC ATATCGCGGG CCTCAACACG CGCGGCGCAC AATTCGCGAA CCTGAAGGTG 
GACGACGACA CCGCGATCCG CCAATGGATG CGCACCGTCG AGCAGTTCGA CAACTGGGCG 
ATGACGGCCG GCACGATCGA CGCGCGCATG CCGGGCCTGC TCCGGCGCAC GGGCCAGCAC 
CCCGTCTACG TGCCGCTCGA GGCCGGTGAA AAGATGCCCG CACCGCAGAA TCGCCGCATC 
GACGTGCGCT CGCTGTCGCT GCTCACCGGC GAGCCGGGGG CGCAGGCGCT CACGCTGCCG 
AAGGCCGATC CGAAGGCGCT GCGTCCGTTC GAGGTCGTCG GCGTGCCGAT CGACAAGCCC 
GGTTTCTACG TGCTCGAACT CGCGTCGCCC GCGCTCGGCC GCTCGCTGCT CGCGAAGCCG 
TCGAGCATGT ACGTGCGCAC CACCGTGCTC GTCACGAACC TCGGCGTGCA CCTGAAACAG 
GGCCGCGAGA ACAACCTCGT GTGGGTCACG ACGCTCGACA AGGGCAAGCC CGTGCCGAAC 
GCGCAAATCC GCGTGTCGGA CTGCAACGGC GACGAGATCG CGACCGGCAA GACCGACGCG 
CAAGGCCTGC TGAAGATCGA CGGCCAATTC GAGCCGAAGC AGGAATGCAA CTCGTCGGAA 
ACCTTCGGCG ACTACTTCGT GTCGGCGCGC GTCGACGATC CGAAGACGGG CCCCGACATG 
GCGTTCGTCA GCTCGAACTG GAACCGCGGG ATCGAATCGT GGCGCTTCAA CGTGCCGACC 
GACACCAGCA GCGAACCGAC CATGCGTGCG CATACCGTGT TCGACCGCAC GCTGCTGCGT 
GCCGGCGAAA CCGTGTCGAT GAAGCACTTC CTGCGCACCG AGACGCTGCA GACCCTCGCG 
TTCCCGGCGC AGTACCCGAC GCGCGTGAAA ATCCGCCATC TCGGCTCCGA CCAGACCTAC 
AAGCTGCCGC TCACGTGGTC GGCCGACCAC AGCGCGGACA CGCAGTTCCC GCTGCCGCCC 
GCGGCCAAGC TCGGCGAATA CAGCGTCACG CTCGAAGGCG GCCCGGACGA TGCGCCGACC 
ACCAGCTACT ACAGCGGCAG CTTCCGCGTC GAGGCGTTCC GCCTGCCGGT GCTCAAAGGG 
TCGATCGGCG CGCGCGACGC GCAGAAAAGC CCGCTCGTCG CGGTCAAGGA AGCGCCGCTC 
GCGGTGCAGA TCGACTACGT GTCGGGCGGC GGCGCATCGA ACCTGCCCGT GCAGGTGTCG 
GCGCTGATGA AGTGGGCGTC GCCGCCGTTC GCGGATCGCT TCGAGGACTT CAGCTTCACG 
CCGTATCGTC CGGAGCGCAG CGACGGCAAC GCCGACGAGG ATGCGCAGGA CGGCGACAAC 
GCATCGGCCG CGAACAACGA CCCCGATGCG ACCAAGCTGA TCGCGGACAA GCTGCCGCTG 
ACGCTCGACC GCAACGGTGC GGGCTCGGTC ACGCTCAAGG GCCTGCCCGA CGTCGACGCG 
CCGAAGCGCA TCGCGCTCGA AGCGACGTTC GCGGACCCGA ACGGCGAAGT GCAGACGATC 
CGCGGCGACA CGATCCTGTG GCCGGCCGCG GTGGTGGCAG GCATCAAGGC CGGCCGCTGG 
GTGTCGGTCG GCCAGCGCGT GCCGGTGCAG GCGCTCGCGG TGGATCTGCA AGGCAAGCCG 
CGTGCGTCGG TGTCGATCGA GATCAAGGGC GTCGCGCACG TCACGACGTC GTCGCGCAAG 
CGGATGGTCG GCGGCTTCTA CGCGTACGAC AACAAGAGCG ACACGCGCGA CCTCGGCGTG 
CTGTGCTCGG GCAAGACCGA CGACAAGGGC CGCATGGCCT GCGACGCGAC GCTCGAACAG 
GCCGGCAACG TCCAGCTGAT TGCGGTCGCG AAGGACGGCG ACGGCCGCAC GTCGAACGCG 
TCGACGTCCG TGTGGGTCAC GCGCGAGGAC GAACTGTGGT TCGGCGGCGA CAACACCGAC 
CGGATCGACG TGATTCCGGA GAAGACGTCC TACGAACCGG GCGAAACGGC CCGCTTCCAG 
GTGCGCATGC CGTTCCGCTA TGCCACGGCG CTGGTCGCGG TCGAGCGCGG CGGCGTGATG 
GAAACGCACA TCGTCGAACT GACCGGCAAG AATCCGACCG TCGACCTGAA GGTCGGCGAA 
TCGTGGGGGC CGAACGTCTA CGTGTCGGTG CTCGCACTGC GCGGCCGGAT TCGCGAGGTG 
CCGTGGTACT CGTTCTTCAC GTGGGGCTGG AAAGCGCCGG TCGAATGGGC GCGCGCGTTC 
TGGCGCGAAG GCCGTCACCA TGAAGCGCCG ACCGCGTTCG TCGACCTGTC GAAACCCGCG 
TTCCGCTACG GCCTCGGCGA GATCAAGGTC GGCACCGGCG TGCATCGTCT CGGCGTGACC 
GTGACGACCG ACGCGACGCG TTACACGGTG CGCGGCAAGG CGCAGGCGCA TGTGAAGGTC 
ACGCTGCCGA ACGGCCAGCC CGCGCCTGCC GGCACGCAGA TCGCGGTCGC GGCCGTCGAC 
GAGGCGCTGC TCGAACTGAT GCCGAACAAC AGCTGGGACC TGCTCGACGC GATGCTGCAG 
CGACGCGCGT ACGGCGTCGA GACGGCCACC GCGCAGATGG AAATCGTCGG CCGCCGCCAC 
TTCGGCCGCA AGGCCGTGCC GGCGGGCGGC GGCGGCGGCA GCGCGCCGAC GCGCGAGCTG 
TTCGACACGC TGTTGCTGTG GAATCCGCGC GTGACGCTCG ACGCGAACGG CAGCGCAAAC 
GTCGAGGTGC CGCTGAACGA CGCGCTCACG CGCTTCCGGA TCGTCGCCGT CGCGGCGGTC 
GGCCCGGACC GCTTCGGCAC CGGCAGCACG TCGATCCGCA GCACGCAGGA CCTGCAACTG 
ATCTCCGGCC TGCCGCCGCT CGTACGCGAA GGCGATGCGT TCCGCGCGCA GGTCACGCTG 
CGCAACACGA CCGACCGCGC GATGCAGGTG GTCGTGACGC CGCGCGTGAC GGGGCTCGAC 
GTCGCGCCGC AAACCGTGTC GCTCGCGGCC AACGCGGCGA CCGAGGTCGC GTGGACGATC 
ACCGTGCCCG AGCAGGCGCT CGACGCGGCC GGCGCGCTGA ACTGGCGCAT CGAGGCGGCC 
GAGCAAGGCG GCAAGCGCGC GTCCGATGCG CTGGCCGTCG CGCAGAAGGT CGTGCCCGCA 
CTGCCGGTGA CCGTGCAGCA GGCCACGCTC ACGCAGGTCG ACGGCACGCT GACGGTGCCC 
GTGTCGGCCC CGGCCGGCGC CGTCAACAAC GCGCAGGGCG CACCGCGCGG CGGCATCGCC 
GTGTCGCTGC AGTCGAAGCT CGCGGACGGC CTGCCCGGCG TGCGGCGCTG GTTCGAGCGC 
TATCCGTACC GTTGCCTCGA ACAGCAGACG TCGCGCGCGA TCGGCCTGCA CGACGCCGCG 
CAATGGCAGG CGCTGGTCGC GCGGATGCCC GTCTACCTCG ACAGTGACGG GCTCGCGAGC 
TATTTCCCGC CGTCGTCCGA CGACGCGCAC TACGGCAGCC CGACGCTGTC GTCGTACCTG 
CTCGTGGTCG CCGACGAAGC CGGCCGCCTC GACCCGCGCT TCGCGCTGCC GGAAGACCTG 
CGCACCCAGC TCGAAGCCGG GCTCGCGCGC TTCATCGATG GCCGCATCGA GCGCAACGCA 
TGGGCGCCGC GCCAGGATCG CGACCTGCGC AAGCTGGCCG CGATCGAGGC GCTGTCGCGT 
CACGGTGCCG CGCAAGGCCG CATGCTCGGC TCGATCGAGA TCGCGCCGAA CCAGTGGCCG 
ACCTCGGCGG TGATCGACTA TCACGCGATC CTCACGCGCG TGAAGGACAT CCCGCAGCGC 
GACGAGAAAC GCGCGCAGGT CGAGCAGATC CTGCGCGCGC GCCTCACGTA CCAGGGCACG 
CAGCTCGTGT TCTCGACCGC GCGCGACGAC GACCTGTGGT GGCTGATGAC GAGCAACGAG 
ACCAATGCCG CGCGCCTCGC GCTGGAATTC GCGGGCGACC CGGCGTGGAA GGACGAGATG 
CCGCGCGTGA CGGCCGGCCT GCTCGCGCTG CAACGCCAGG GCGCATGGCA GACGACGACG 
TCGAACGCAC TCGGCCAGCT CGCGGTCGAG CGCTTCTCGC GCACCTACGA GAGCGTGCCG 
GTCGCCGGCA CGACGAAGGT CGCCCTCGGC GGCAACGAGC GTGCGATCGC GTGGTCGCAG 
GCAGGCTCGG CCGCGCCCGC CGATACGCCC GCGTCGGCCA CGCCCGCGAC CCGCGCCGCC 
GCCGCGCGCA GCGTGCTGAT GCCGTGGCCG CGTGCGTCGC AGGCGCCGGC CACGCTGTCC 
GTCACGCAGG ATGGCACGGG CCGCCCGTGG GCAACGGTCG AAAGCCTCGC GGCCGTGCCG 
CTGCGCGCGC CGTTCGCGGC AGGCTACCGG ATCACGAAGA CCGTCACGCC CGTGTCGCCC 
GCCGTCAAGG GCGTGCTGAC GCGCGGCGAC GTCGTGCGCG TGCATCTCGA CATCGACGCG 
CAGAGCGACA TGACGTGGGT CGTCGTCAAC GATCCGATTC CGTCAGGCGC GACGATTCTC 
GGCTCGGGCC TCGGCCGCGA CTCTGAAGCC GCGACACAGG GCGAGAAATC CCCGGACGGC 
GCATGGCCGG CGTTCATCGA GCGCGACTTC GACGGCTACC GCGCGTATTA CGACTATCTG 
CCGAAGGGCA AACTCTCGGT CGAATACACG GTGCGGCTGA ACAACGTCGG CACCTTCGGG 
CTGCCGCCGA CGCGCGTCGA GGCACTGTAC GCACCGTCCG TGTACGGCCT CTGGCCGAAC 
CCGCCGATGA CGGTGAAGCC GGCCGACGCG GGCAAGTCGT GA 

 

Protein sequence

MKQHDKHNNT HQSNHTTRLL WRIGAIAALG AAAALSLHAL AARTVSVSPQ GTVTEVRQSV 
VKFDEPMVAF GSASAPNPAR MTCNDSTAAR GQGHWLDDKT WVYDFENDLP PGVRCSVALN 
DTLRSVAGNA VSGPRRFTFQ TGGPFPVTVR PGSREIEERQ VFVLKLNGPA EPRSALANIW 
CEAAGIGNRI PVTATDDATR NALLDHFGLK KDAARVLTLS CAQALPASAK MQLVYGKGVA 
SPSGIANDTE RRFDFTVRAP FTASFSCERE NAKAPCTPLR PLTLSFNAPI SRKNAEAIKL 
RGPDGSLSPT FGADDHSDEV TTVTFNPPLP AQANLTIELP SGLRDVTDRA LANTDLFPLA 
TRTAPMPPLA KFSSGTFGIV ERFAEPDTPA LVPVTLRNVE ADLHIAGLNT RGAQFANLKV 
DDDTAIRQWM RTVEQFDNWA MTAGTIDARM PGLLRRTGQH PVYVPLEAGE KMPAPQNRRI 
DVRSLSLLTG EPGAQALTLP KADPKALRPF EVVGVPIDKP GFYVLELASP ALGRSLLAKP 
SSMYVRTTVL VTNLGVHLKQ GRENNLVWVT TLDKGKPVPN AQIRVSDCNG DEIATGKTDA 
QGLLKIDGQF EPKQECNSSE TFGDYFVSAR VDDPKTGPDM AFVSSNWNRG IESWRFNVPT 
DTSSEPTMRA HTVFDRTLLR AGETVSMKHF LRTETLQTLA FPAQYPTRVK IRHLGSDQTY 
KLPLTWSADH SADTQFPLPP AAKLGEYSVT LEGGPDDAPT TSYYSGSFRV EAFRLPVLKG 
SIGARDAQKS PLVAVKEAPL AVQIDYVSGG GASNLPVQVS ALMKWASPPF ADRFEDFSFT 
PYRPERSDGN ADEDAQDGDN ASAANNDPDA TKLIADKLPL TLDRNGAGSV TLKGLPDVDA 
PKRIALEATF ADPNGEVQTI RGDTILWPAA VVAGIKAGRW VSVGQRVPVQ ALAVDLQGKP 
RASVSIEIKG VAHVTTSSRK RMVGGFYAYD NKSDTRDLGV LCSGKTDDKG RMACDATLEQ 
AGNVQLIAVA KDGDGRTSNA STSVWVTRED ELWFGGDNTD RIDVIPEKTS YEPGETARFQ 
VRMPFRYATA LVAVERGGVM ETHIVELTGK NPTVDLKVGE SWGPNVYVSV LALRGRIREV 
PWYSFFTWGW KAPVEWARAF WREGRHHEAP TAFVDLSKPA FRYGLGEIKV GTGVHRLGVT 
VTTDATRYTV RGKAQAHVKV TLPNGQPAPA GTQIAVAAVD EALLELMPNN SWDLLDAMLQ 
RRAYGVETAT AQMEIVGRRH FGRKAVPAGG GGGSAPTREL FDTLLLWNPR VTLDANGSAN 
VEVPLNDALT RFRIVAVAAV GPDRFGTGST SIRSTQDLQL ISGLPPLVRE GDAFRAQVTL 
RNTTDRAMQV VVTPRVTGLD VAPQTVSLAA NAATEVAWTI TVPEQALDAA GALNWRIEAA 
EQGGKRASDA LAVAQKVVPA LPVTVQQATL TQVDGTLTVP VSAPAGAVNN AQGAPRGGIA 
VSLQSKLADG LPGVRRWFER YPYRCLEQQT SRAIGLHDAA QWQALVARMP VYLDSDGLAS 
YFPPSSDDAH YGSPTLSSYL LVVADEAGRL DPRFALPEDL RTQLEAGLAR FIDGRIERNA 
WAPRQDRDLR KLAAIEALSR HGAAQGRMLG SIEIAPNQWP TSAVIDYHAI LTRVKDIPQR 
DEKRAQVEQI LRARLTYQGT QLVFSTARDD DLWWLMTSNE TNAARLALEF AGDPAWKDEM 
PRVTAGLLAL QRQGAWQTTT SNALGQLAVE RFSRTYESVP VAGTTKVALG GNERAIAWSQ 
AGSAAPADTP ASATPATRAA AARSVLMPWP RASQAPATLS VTQDGTGRPW ATVESLAAVP 
LRAPFAAGYR ITKTVTPVSP AVKGVLTRGD VVRVHLDIDA QSDMTWVVVN DPIPSGATIL 
GSGLGRDSEA ATQGEKSPDG AWPAFIERDF DGYRAYYDYL PKGKLSVEYT VRLNNVGTFG 
LPPTRVEALY APSVYGLWPN PPMTVKPADA GKS