| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4396 |
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| Symbol | |
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| ID | 6180273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1471304 |
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| End bp | 1473898 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684157 |
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| Product | hypothetical protein |
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| Protein accession | YP_001811068 |
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| Protein GI | 172063417 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.195504 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0070818 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTTCCC GCCACTCTGG TCCGCCCGGC CGCGCCGCGG CGGCGATCGC CCGTGTGTCG
ACGCTGATCC GCAACGAGCG CGTGCTGTCG CCGCTGCTCG CGCTCGGCAT CGGCCTGCTG
CTGATCGTGG TTTTCCAGCA CCTGTCCGAA TCCGTCGACT ACCGGTCGGT GATCCGCCAG
CTGCGCCACC TGTCCGTCGG CGAATGGGGC GCATCGCTCG CCGCGACGGC CCTCAGCTAT
CTCGCGCTCG TCGCCCGCGA TGCGGTCGGC CTGCGCTACG TCGCCGCGAA GGTGCCGCGC
GCCGCGCTGT GGATCGGCTC GATCGCCGGC TCGGCGCTCG GCAACGCGAC CGGCTTCGGC
GCGCTCACGG GCGGCGCCGT GCGCGCGCGC GTGTACGGCG TGTCGGGCGT CACGCCTGCG
CAGATCGGCC GGATGACGGT ATTCACGAGC GGCACGCTCG CGCTCGCCCT GGTGCTGATG
ACGGCGGTCG GCATGGTCTG CGTGCCGCAG ACGCTCGCCG CGATGCTGCA TGTCGCGCCG
GGCGTGCTCA CGTGGAGCGG CGCCGCGCTG CTCGTGCTGC TGGCCGTCGT GGTCGCGATG
TGCGGCAACA CCGCGCGTCC GGTCGTCACG CGCTTCAAAT GGCTCGCGTT CGACGTGCCG
GCACGGCGCG ACCTCGTCGC GCAGGTCGTC TACGCGGTGC TCGATGTCGT GGCCGCCGGC
CTGACGCTGT GGGTGTTGCT GCCGGTCGCG CCGGTCGGCT TCCCGACCTT CATCACGGTC
TACGCGGCCG CGCTGCTGCT CGGGATGATC GGTCATACGC CGGGCGGGAT CGGCGTGTTC
GAAGCCGCGA TGGTGTTCAC GCTGGGCCGC GAAGTGCCCG CGCACGCGAT GGTCGCCGCG
CTGATCGCCT ATCGCGCGAT CTACTTCGGC GTGCCGCTCG TGCTGTCGGC CGGCCTGCTG
GCCGGCTTCG AGGGCCGCGC GCTGCGGCGC CGGCTCGTGT CGCGGCAGGC GGCGCGCGTG
TCGCAACTGG CGCCGCTGTT CCTGAGCCTC GTGACCTTCG CGGTCGGCGG GATGCTGGTG
ATCTCGAGCG CGACGCCCGC GTTCTGGCAC CGTATCGCGA TCCTGCGCAA CATCGTGCCG
CTGTGGGTGC TCGAAGGCTC GCAGGTGATC TGCAGCGTGC TGGGCGTCGC GCTGCTGTTC
GTCGCGCGCG GGCTGCTGCG CCGGCTGGAC GGCGCGTGGT GGATGACCTT CGCGTTGACG
CTCGCGAGCC TCGCGCTGTC GCTGGCGAAG GGCCTGGCGT TCGTCGAGGC CGGCGTGCTC
GGAACGCTGC TGGTGCTGCT GCTCGTCAGC CGCCGCCGCT TCAGCCGGCA TTCGTCGCTG
CTCGCCGAGC GCTTCACGGT GAGCTGGTTC GTGTCGGTGA CGATGGTGCT GATCCTCGCG
GTATGGGTGC TGTGCTTCGC GTTCCGCGAT GTGCCGTACA CGCGCGATCT GTGGTCGCAT
TTCTCGTTCG ACGCACGCGC GCCGCGCGCG CTGCGCGCCA CGCTCGCGGC CGGCGTGTTC
GTCGCGCTGT TCGCGCTGTG GCAGCTGCTG CGCCCGGCGC CGGGCCGTTT CGTGAAGCCG
GTCGCGCAGG ACCTGCTCGA CGCCGAGCAG ATCATCCGCG CGCAGGAATG CAGCGACGCG
GGCCTCGCGT TGATGGGCGA CAAGTCGTTC CTGTTCTCCG AATCGCGCCG CGCGTTCCTG
ATGTACGCGA AAAACGGCCG CACGTGGGCC GCGCTGCACG ATCCGGTCGG CCCGCGCGAG
GAATGGCCGG CGCTGATCAG CAAGTTCATT GCGCTGGCGC ACGCGCACAG CGGCCGCGCG
GCGTTCTACC AGGTGCGCGC GAACGCGCTG CCGCTGTACC TCGACGCGGG GCTCACGCTG
ATGAAGCTCG GCGAGGAAGC GCACATCGCG CTCGACCGGT TCGACCTGAA GGGTTCGAAC
CGTTCGCACC TGCGCTACGC GCTGCGCCGC GGCGACAAGG ACGCGCTGAC GGTCGAGGTG
ATCGCGCCCT GCGACGTGCC GGCGGCGCTG CCGTCGCTGC GCGACATCTC GGACGGCTGG
CTCGACAGCC GCGATGCGCG CGAGAAGAGC TTCTCGGTGG CTGCGTTCCA CGACGGCTAT
CTCGCGACGC AGTCGGTGAT GCTGGTGCGC CAGGCCGACA AGCCGATTGC ATTCGTCACG
TTCATGACGA CCGACCTCAA CACCGAGGCG ACGGTCGGCG TGATGCGTCA TCTGCCGGAA
GCGTCGCCGT ATGCGATGGA GTATCTGTTT ACGCAGCTCG CGCTGCATTT GAAGGAAGCG
GGGTTCCGCA AGCTGAGCCT GGGTATCGCG CCGTTCTCGG GGATGGGGGC GGCGAAGATG
CCGTCGCCGT GGCACCGGCT CGGGCTGATG GTCTGGCGCT TCGGCGGCCG TTTCTACAAC
TTCCGTGGCT TGCGTGCATT CAAGAGCAAG TTCGAGCCGC ACTGGGAGCC GCGTTATCTC
GCGGCCTCGG GCTCGGTCGG CGTGTTCGTC ACGCTCGCGG ATCTATCCCT GCTGGCTGGA
GGTCGGCGCT CATGA
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| Protein sequence | MSSRHSGPPG RAAAAIARVS TLIRNERVLS PLLALGIGLL LIVVFQHLSE SVDYRSVIRQ
LRHLSVGEWG ASLAATALSY LALVARDAVG LRYVAAKVPR AALWIGSIAG SALGNATGFG
ALTGGAVRAR VYGVSGVTPA QIGRMTVFTS GTLALALVLM TAVGMVCVPQ TLAAMLHVAP
GVLTWSGAAL LVLLAVVVAM CGNTARPVVT RFKWLAFDVP ARRDLVAQVV YAVLDVVAAG
LTLWVLLPVA PVGFPTFITV YAAALLLGMI GHTPGGIGVF EAAMVFTLGR EVPAHAMVAA
LIAYRAIYFG VPLVLSAGLL AGFEGRALRR RLVSRQAARV SQLAPLFLSL VTFAVGGMLV
ISSATPAFWH RIAILRNIVP LWVLEGSQVI CSVLGVALLF VARGLLRRLD GAWWMTFALT
LASLALSLAK GLAFVEAGVL GTLLVLLLVS RRRFSRHSSL LAERFTVSWF VSVTMVLILA
VWVLCFAFRD VPYTRDLWSH FSFDARAPRA LRATLAAGVF VALFALWQLL RPAPGRFVKP
VAQDLLDAEQ IIRAQECSDA GLALMGDKSF LFSESRRAFL MYAKNGRTWA ALHDPVGPRE
EWPALISKFI ALAHAHSGRA AFYQVRANAL PLYLDAGLTL MKLGEEAHIA LDRFDLKGSN
RSHLRYALRR GDKDALTVEV IAPCDVPAAL PSLRDISDGW LDSRDAREKS FSVAAFHDGY
LATQSVMLVR QADKPIAFVT FMTTDLNTEA TVGVMRHLPE ASPYAMEYLF TQLALHLKEA
GFRKLSLGIA PFSGMGAAKM PSPWHRLGLM VWRFGGRFYN FRGLRAFKSK FEPHWEPRYL
AASGSVGVFV TLADLSLLAG GRRS
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