| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4268 |
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| Symbol | |
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| ID | 6179992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1324979 |
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| End bp | 1327279 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641684037 |
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| Product | helicase c2 |
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| Protein accession | YP_001810948 |
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| Protein GI | 172063297 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0100597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.178799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATG TCGTCGCCGT GCGGGCAATG TGCGAGTTCA CCGCGCGACG CGGCGATCTC
GACCTGCGCT TCACGCCCGC GCCGACCGCG CTCGAAGGCA TCGCCGGTCA CGGCGCGGTC
ACGTCGAAGC GCGGCGCGCG CTACGAAACC GAGATCGCGC TGACCGGCAC GTGGGGCACG
CTGACCGTGC GCGGACGCGC GGACGGTTAC GATCCGGTCG CGAACCGGCT CGAGGAGATC
AAGACCTACC GCGGCAGCCT CGATGCGATG CCGGCCAACC ACCGCGCGCT GCACTGGGCG
CAGGCGAAGG TCTATGCGCA CCTGATGTGC GACGCACGCG GCCTCGCGGA AATTAACGTC
GCGCTCGTGT ATTTCGACAT CGTGTCCGAG CGCGAGACCG TGCTGACGGA AACGCTGAGC
GCGAGCATGC TCGCCGCGTT CTTTGCCGAG CAGTGCGCGT GCTTCGTCGG CTGGGCCGAG
CGCGAGACCG CGCATCGCGC GGCCCGCGAT GCGGCGCTGC GTGCGCTGGC GTTTCCGCAC
GGGCAATTCC GCAGCGGTCA GCGCGAGCTG GCGGTGTCCG TCTATCGGGC GGCGCGCGAC
GAACGCTGCC TGATGGCGCA GGCGCCGACC GGCATCGGCA AGACGCTCGG CACGGTCTTC
CCGCTGCTGA AGGCGTGCGG CGAGGGCGAG CTCGATCACG TGTTCTTCCT GACCGCGAAG
ACGCCCGGCC GCGCGCTCGC GCTCGAGGCG GCGACGACGC TCGGCGCCGG CACGCCGGCG
CTGCCGCTGC GCGTGCTGGA GCTCGTCGCC CGCGACAAGG CGTGCGAGCA TCCGGACCGC
GCGTGTCACG GCGAATCGTG CCCGCTCGCG CAAGGCTTCT ACGACCGGCT GCCGGCCGCG
CGCGACGCGG CGATCGGCGC CGGGCTGCTC GATCGCGCCA CCGTGCGCGA GGCTGCGCTC
GCGCACGACA TCTGTCCGTA TTACCTCGCG CAGGAGCTGG CGCGCTGGTC GGATATGGTG
ATCGGCGACT ACAACTACTA CTACGATGGC AGCGCGATGC TGCATACGCT TGCGCAGCAG
AACCAGTGGC GTGTCGGCGT GCTCGTCGAC GAGGCGCACA ACCTGCTCGA TCGCGCCCGC
AGGATGTACA GCGCGTCGCT CGACCCGTTC GCATTCGCGG CCGCGCGCGA GGCGGCGCCG
GCGGCGCTGC GCAAGGCGTT CGACCGGCTT GCGCGCGCAT GGGGCACGGT CAATCGCGCA
CAGGCCGAGC GCTATGCGGC CTATCCGGAG ATTCCGGGGC CGATCGTGTC GGCCGTGCAG
AACCTCGTCG CGGCGATCGG CGAACACCTG ACCGATGCGC CGCGCGCGAA CGACGACGCG
CTGCTGCGGT TTCATTTCGA GGCGATCCAG TTCGGCGTGC TCGCCGACGC GTTCGACAGC
GCGTCGATCT TCGACGCGAC GCTGCACGGC GAGCCGCTGC CGCGCCAGTC GGGGCTCGAC
GGCGTCGCGC CGGCCGGCCG CCAGCGCCGC ATCCAGTCGA CGCTGTGCGT GCGCAACGTG
ATTCCGGCCG CCTTTCTTGC GCCGCGCTAC GAAGCCGCGC GCGCGACCGT GCTGTTTTCC
GGCACGCTGA GTCCGTTTCA TTTTTATCGC GACACGCTCG GGCTGCCGGC CGACACGGGC
TGGCTCGACG TCGACGGGCC GTTTCGCGCC GAGCAACTGA CCGTGCGCGT CGCGAGCCAT
GTGTCGACCC GCTGGCGCGA CCGCGACCGT TCGCTCGAAC CGATCGCGGA CCTGATCGCC
GCGCAGTATG CGACGCGACC GGGCAACTAC CTCGGTTTTC TCAGCAGCTT CGACTATCTC
GGCCGCGTCG TCGCGCTGAT GCAGACGCGC CATCCGGACG TGCCCGTGTG GGCGCAGGCG
CCCGGCATGG CCGAAAGCGA GCGCGACGCG TTTCTCGCGC GCTTCGACGC GGGCGGGCGC
GGTATCGGCT TCGCGGTGCT GGGTGGTGCG TTCTCGGAAG GTGTGGATCT CGTCGGCGAG
CGGCTGATCG GTGCGTTCAT CGCGACGCTC GGACTCCCGC AGGTCAACGA CGTCAACGAA
CAGATGCGGC GCGCGATGGA GGCGCGTTTC GGCAACGGCT ACGACTACAT GTATCTGTAC
CCGGGCCTGC AGAAGGTCGT GCAGGCTGCC GGGCGCGTGA TCCGCACCGA GCACGACGAG
GGCGTCGTGC ACCTGATCGA CGATCGTTAC CGGCGGCGGG AGGTGCGCGA TCTGCTGCCG
CGCTGGTGGC GGATCGGGTG A
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| Protein sequence | MSYVVAVRAM CEFTARRGDL DLRFTPAPTA LEGIAGHGAV TSKRGARYET EIALTGTWGT
LTVRGRADGY DPVANRLEEI KTYRGSLDAM PANHRALHWA QAKVYAHLMC DARGLAEINV
ALVYFDIVSE RETVLTETLS ASMLAAFFAE QCACFVGWAE RETAHRAARD AALRALAFPH
GQFRSGQREL AVSVYRAARD ERCLMAQAPT GIGKTLGTVF PLLKACGEGE LDHVFFLTAK
TPGRALALEA ATTLGAGTPA LPLRVLELVA RDKACEHPDR ACHGESCPLA QGFYDRLPAA
RDAAIGAGLL DRATVREAAL AHDICPYYLA QELARWSDMV IGDYNYYYDG SAMLHTLAQQ
NQWRVGVLVD EAHNLLDRAR RMYSASLDPF AFAAAREAAP AALRKAFDRL ARAWGTVNRA
QAERYAAYPE IPGPIVSAVQ NLVAAIGEHL TDAPRANDDA LLRFHFEAIQ FGVLADAFDS
ASIFDATLHG EPLPRQSGLD GVAPAGRQRR IQSTLCVRNV IPAAFLAPRY EAARATVLFS
GTLSPFHFYR DTLGLPADTG WLDVDGPFRA EQLTVRVASH VSTRWRDRDR SLEPIADLIA
AQYATRPGNY LGFLSSFDYL GRVVALMQTR HPDVPVWAQA PGMAESERDA FLARFDAGGR
GIGFAVLGGA FSEGVDLVGE RLIGAFIATL GLPQVNDVNE QMRRAMEARF GNGYDYMYLY
PGLQKVVQAA GRVIRTEHDE GVVHLIDDRY RRREVRDLLP RWWRIG
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