| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4164 |
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| Symbol | |
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| ID | 6181321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1207814 |
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| End bp | 1208776 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641683933 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001810844 |
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| Protein GI | 172063193 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.571077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.349969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACGG TCCGCGCGCT GCCGCTCGCG CTGGCCGTCG CCGCGCTGCT CAGCGGTTGC
GGACGGCCCG CAGACACCGG CCCGACCTAC CAGGGCTATG TCGAAGGCGA ATTCGTGTAC
CTGTCGTCGT CGCAAGCGGG CACGCTGACC CAGCTGTCAG TCGAACGCGG CCAGGCCGTC
GCGGCCGGCA CGCCGGTATT CGCGCTCGAA GCCGTCAGCG AAACGGCCGC GCTGCAGCAG
GCGCAGCATC AGCTCGCGGC CGCACGCGCG CAGCTTGCCG ACCTGCAGAC CGGCAAGCGC
CCGCCGGAAG TCGCGGTCAC GCGTGCCCAG CTCGCGCAGG CCACCGCACA AGCGGCGCGG
GCCGCCGCGC AACTCGCGCG CGACGAACGC CAGTACGCGG CCGGCGGCCT GTCGAAGCAG
CAGCTCGACG ATACGCGCAC GTCCGCGCAA ACCACCGCCG CGCAGATGCG CGAGCTGCAG
AACCAGGTCG ATGTCGCGCG TTTGCCGGGC CGCGCGCAGC AGGTCGCCGC CCAGGCCGCG
CAGGTCGACG CCGCGCAGGC CGCCGTGGCC GAAGCGCAAT GGAAGTTCGA CCAGAAGCGC
ATCGCCGCGC CGGCCGACGG ACGCGTGTAC GACACGCTGT ACCGCGTCGG CGAATGGGTG
CAGGCCGGCA ATCCGGTCGT GCAGATGCTG CCGCCGCAGA ACCTGAAAGT GCGCTTCTTC
GTGCCGGAGG CGGCCATCGC GTCGCTCGCG CCGGGGCGCA CGATCGCGAT CCACTGCGAC
GGCTGCGCGG CCGACGTGCC CGCGCGCATC ACCTACGTGT CGCGCGCGGC CGAATACACG
CCGCCGGTGA TCTACAGCAA CGAGAGCCGG AGCAAGCTCG TGTTCATGGT CGAGGCGCGC
CCGGCGCCCG CCGATGCGCC GAAGCTGCAT CCGGGCCAGC CCGTCGCCGT GAGGGTGCGT
TGA
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| Protein sequence | MSTVRALPLA LAVAALLSGC GRPADTGPTY QGYVEGEFVY LSSSQAGTLT QLSVERGQAV
AAGTPVFALE AVSETAALQQ AQHQLAAARA QLADLQTGKR PPEVAVTRAQ LAQATAQAAR
AAAQLARDER QYAAGGLSKQ QLDDTRTSAQ TTAAQMRELQ NQVDVARLPG RAQQVAAQAA
QVDAAQAAVA EAQWKFDQKR IAAPADGRVY DTLYRVGEWV QAGNPVVQML PPQNLKVRFF
VPEAAIASLA PGRTIAIHCD GCAADVPARI TYVSRAAEYT PPVIYSNESR SKLVFMVEAR
PAPADAPKLH PGQPVAVRVR
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