Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4031 |
Symbol | |
ID | 6181005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1051744 |
End bp | 1052679 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641683801 |
Product | hydroxyproline-2-epimerase |
Protein accession | YP_001810712 |
Protein GI | 172063061 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3938] Proline racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.113394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGC GCATTCAGAT CATCGATTCG CACACGGGCG GCGAACCCAC GCGGCTCGTC GTGTCCGGCT TCCCCTCGCT CGGCAACGGC ACGATGGCCG AGCGCCGCGA CGTGCTCGCG CGCGAGCACG ATCGCTACCG CACCGCGTGC ATTCTCGAGC CGCGCGGCAG CGATGTGATG GTCGGCGCGC TGCTGTGCGA ACCCGTGTCG CCGGAGGCTG CGGCCGGCGT GATCTTCTTC AACAACAGCG GCTACCTCGG GATGTGCGGG CACGGCACGA TCGGCGTCGT GCGCACGCTG CATCACATGG GCCGCATCGA GCCGGGCGTG CACCGGATCG AAACGCCGGT CGGCACCGTC GAGGCGACGC TGCACGACGA CCTGTCGGTC AGCGTGCGCA ACGTGCTCGC GTATCGCCAT GCGAAGGCCG TCGCCGTCGA CGTGCCGGGC TACGGCTCCG TGAAGGGCGA CATCGCGTGG GGCGGCAACT GGTTCTTCCT GATCAGCGAT CACGGCCAGC GCGTGGCCGG CGACAACGTC GCGGCGCTGA CCGCTTATTC GTCCGCCGTG CGCGAAGGGC TCGAGCGCGC GGGCATCACC GGCGCGAACG GCGGCGAGAT CGACCATATC GAACTGTTCG CCGACGATCC CGAGCACGAC AGCCGCAGCT TCGTGCTGTG TCCGGGCCAT GCATACGACC GTTCGCCGTG CGGCACCGGC ACGAGCGCGA AGCTCGCCTG CCTCGCGGCC GACGGCAAGC TCGAACCGGG TGTCGTGTGG CGGCAGGCGA GCGTGATCGG CAGCGTGTTC CAGGCGAGCT ATGCGCAGGC CGACGGCGGC ATCGTGCCGA CGATCCGCGG CAGTGCGCAT CTCAGCGCGG AAGCGACGCT GCTGATCGAG GAAGACGATC CGTTCGGCTG GGGCATCGTG TCGTGA
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Protein sequence | MMKRIQIIDS HTGGEPTRLV VSGFPSLGNG TMAERRDVLA REHDRYRTAC ILEPRGSDVM VGALLCEPVS PEAAAGVIFF NNSGYLGMCG HGTIGVVRTL HHMGRIEPGV HRIETPVGTV EATLHDDLSV SVRNVLAYRH AKAVAVDVPG YGSVKGDIAW GGNWFFLISD HGQRVAGDNV AALTAYSSAV REGLERAGIT GANGGEIDHI ELFADDPEHD SRSFVLCPGH AYDRSPCGTG TSAKLACLAA DGKLEPGVVW RQASVIGSVF QASYAQADGG IVPTIRGSAH LSAEATLLIE EDDPFGWGIV S
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