| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4007 |
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| Symbol | |
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| ID | 6179716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1019894 |
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| End bp | 1020952 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683777 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001810688 |
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| Protein GI | 172063037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.188369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGACGA CGAAACACGC GGCGAAGATG TCGCCCGCGC CGGGTTCCGG CAGCGCGAAG
GACGCGCCGG CGGCGACGCC AGCAACACCC GCCGCGCCGA CCACCGTCGC GCCCGGCCGC
GTGCTGCGCG TGACGCACGA CACCGAATAC CGCTACGCGG CGCGCGTCGA ATCCGCGCAG
CACCAGGCGC GGCTGCAGCC GCTCGCCACG CCGCGCCAGC AGGTGCTGTC GTTCGCGCTC
GACATCGAGC CCGCCGCGGA GTCGGTCTGC ACCGAGATCG ATGCGTTCGG CAACGCGCGC
GCGTCGTTCG CGCTGAACCA GCCTCACGAT GCGCTGCTCG TGCGCAGCCG CAGCACGGTG
CGCGTGAGCG CGCCTGTATG GTCGCTAGGG GCACGCGGCG CACCGCCGCC CGCGATCGCG
AGCCCCGACG CCGAACATGC GATGGCGTGG GAAGCCGTGC GCGAGCGCTT GCAGTTTCGC
GCGGGACAGC CGTACGACGC GGCGAGCGAG TTCGTGTTTG CGTCGCCGCA CGTGGCGTGC
GATCCCGAAC TGGCCGCGTA TGCGGCCGCG AGCTTCACGC CGGGGCGGCC GCTCGTGCAG
GCCGCGTGGG ACCTGATGCG GCGAGTTCAC GCGGATTTCG CGTATACGCC GAACAGCACC
GACATCACGA CGACCGCGCT CGATGCGTTG CGATTGCGCA AGGGCGTCTG CCAGGATTTC
GCGCACGTGA TGATCGGCGC GCTGCGCTCG CTCGGACTCG CCGCGCGCTA TGTGAGCGGG
TATCTGCTGA CGCAGCCGCC GCCCGGGCAG CCGCGGCTGA TCGGCGCGGA TGCGTCGCAT
GCATGGATCG ACGTGTATGA CCCGGCATGG CCCGAAGATG GCGGCTGGCT GCAACTCGAC
CCCACCAACG ACCGTGCGCC GGGTGACGAC TACGTGATGC TGTCGATCGG CCGCGACTAT
GCAGACGTGA CGCCGTTGCG CGGCGTGATA CGCGGCGGCG GCGCGGATCA GGAGCTGAAG
GTCGGCGTGA CGGTCGAGCC GCTCGACGAA GCGTCGTGA
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| Protein sequence | MVTTKHAAKM SPAPGSGSAK DAPAATPATP AAPTTVAPGR VLRVTHDTEY RYAARVESAQ
HQARLQPLAT PRQQVLSFAL DIEPAAESVC TEIDAFGNAR ASFALNQPHD ALLVRSRSTV
RVSAPVWSLG ARGAPPPAIA SPDAEHAMAW EAVRERLQFR AGQPYDAASE FVFASPHVAC
DPELAAYAAA SFTPGRPLVQ AAWDLMRRVH ADFAYTPNST DITTTALDAL RLRKGVCQDF
AHVMIGALRS LGLAARYVSG YLLTQPPPGQ PRLIGADASH AWIDVYDPAW PEDGGWLQLD
PTNDRAPGDD YVMLSIGRDY ADVTPLRGVI RGGGADQELK VGVTVEPLDE AS
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