| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4001 |
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| Symbol | |
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| ID | 6179406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1008461 |
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| End bp | 1009453 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683771 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810682 |
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| Protein GI | 172063031 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.371452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.240792 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA AGTGGCTGGA AGATTTCCTG AGCCTTGCGG ATACCAAGAG CTTTTCCCGG
GCCGCGCGTC ATCGGCACCT CACGCAGTCG GCGTTCAGCA GACGAATCGC CGCGCTCGAA
ACGTGGATGG ACGCAAAGCT GGTCGACCGC AGCATCAACC CCATCACGCT GACACCGGCC
GGCCAGATGT TCCGCGGCCT GGCCGCGGAC ATCCTGCGCA GCATGTACGC GGCACGCAAC
CTCGTGAACG GCTACGACCA GTTCGCGGCC AGCGACCAGG TCGTGCGCTT CGCGGTCGCG
CATACGCTCG TGTTCACGCT GTTCCCCGAA TGGCTCAAGC AGTTGAACGG CGAAGTCGGC
CATGTGACCG CGCGCGTCAA TGCGGTGAAC GTGCCCGAAG GCGTGCAGCA ACTGGTCGAA
GGTGAGTGCG ACCTGCTGCT CGGCTATCAC CATCCGCAAC TGCCGATCGT GCTCGATCCG
AACCACTTCC CGTTCGTCAC GCTCGGCGTC GAACGGATCC TGCCGGTGTC GACGCCCGAC
GCGCACGGCC GGCCGGTATT CGAACTGCCG GGCACGCCGG ACGCGCCGCT GCCGCTGCTC
GCGTATTCAT CTGGCGCGTT CCTCGGGAAC GTCGTCGAGA TGCTGCTGCT GAACGCGTCC
GAATCGTATG CGCTGCACCG CTGCTTCGAG ACGCACATGT CCGAGGCGCT CAAGGGGATG
GTCGTGGCCG GGCACGGGAT CGGCTGGCTG CCCGAAAGCT GCGTGGCGAA GGAACTCGCG
GAAGGTTCGC TCGTGCGGGC GGGCTCGGCG GACTGGATCA CCGAACTCGA GATCCGCCTG
TACCGGTCCG CGCGCAAGCG CGGGCTCGCG GCCGAACAGC TGTGGACCTA CATCATGAAC
CGGCCGCGCA CCGCGTCCGA CGGCCCGATC GCGGCCGAGC CGGCCGCGCC GGCCGTGCGC
ATCGCACGCC GCAGTGTCGG CGGCAGCCGA TAA
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| Protein sequence | MEAKWLEDFL SLADTKSFSR AARHRHLTQS AFSRRIAALE TWMDAKLVDR SINPITLTPA
GQMFRGLAAD ILRSMYAARN LVNGYDQFAA SDQVVRFAVA HTLVFTLFPE WLKQLNGEVG
HVTARVNAVN VPEGVQQLVE GECDLLLGYH HPQLPIVLDP NHFPFVTLGV ERILPVSTPD
AHGRPVFELP GTPDAPLPLL AYSSGAFLGN VVEMLLLNAS ESYALHRCFE THMSEALKGM
VVAGHGIGWL PESCVAKELA EGSLVRAGSA DWITELEIRL YRSARKRGLA AEQLWTYIMN
RPRTASDGPI AAEPAAPAVR IARRSVGGSR
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