| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3998 |
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| Symbol | |
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| ID | 6180793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1003339 |
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| End bp | 1006395 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683768 |
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| Product | hypothetical protein |
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| Protein accession | YP_001810679 |
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| Protein GI | 172063028 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.706875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.141155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCAACA ATCGTAAAGA ACAATGCACC ACCGTCGCTC CGTCCAACCG GCGGATCCTC
CTGCATGCGC CATTGCTGTT GCTGCTCGTC GCGTCCGGCC CCTGCTTCGC CGCCGAAGGC
GACGCGGAAC CGGGCAGCGC GCGCGAAATC GCCGGGACCC ACGGCGCGCG GGATGCGCTG
CCGCCCGACA TGCAGCCGAC GGGAACGCCG ATGCAGGCCG CCCAGGATTC GGGCACGCTG
CCTCCTCATG CGCCGACGCC GATCGCGCTG GCGTCCGACG CGTCGCTGCA GATGGCTCAG
GCATCGCCTA TGCCGATCAC GGTCGTGGTG GAGCCGGAAG CGCCGCAATC GGGCGAGCCG
GCGCCGGGCG CGCAGCCCCC CGATCCGCCG ACACCTGTCG CGCCGACGCC CGACGGGCCG
AGGCAACTGG CGCAGGTGCC CGACACCGCA CCGGCGAACA CGGCGGCACC GATGGCGCAG
ACGCAGGACG CGCCGATGCA ACTGGCGCAG ACCTCCGACA GCGCACCGCC GAGTACACCT
GCACCGGTCG CGCAGACGCA GGATGCGCCG ATGCCACCCG CGCAGGCGTC CGACACCACA
CCTCCGAATA CGCCTGCACC GATCGCACAG ACGCAGGACG CCCCGATGCA AGCGGCGCAG
GCATCCGACA CCGCCCCGCC GAACACGCCA GCGCCGGTCG CACAGACGCC GGACGCGCCG
ATGCCGCCTG CGCAGGCGTC CGACAGCCCC CCGCCGAACA CACCTGCACG GATCGCGCAG
ACGCAGGACG CCCCAATGCC GCCTGCACAG GCCACCAGCA GCCAACCGCC TGATACACCG
GCGCCTACCG CCGCAACGCC ATCCCAACCA TCCGCATCGG CCGCTCCGGC GCCAGCCCCG
AGCGCGCAAC CCCCGGACAC TGCGCCGCAG CCCGCACAAG CCGCGACCAC CACTCCGCCG
AATTCACAGA CGCAAACCGC TCAGGCATCC GGCACGCCGA TGCCGAACTC GCCCACGCCC
GTGACGCAGA TGCCGGGCGC GCAATCGCCG TCGTCCCAAG GGCCGAGTTC ACAGACACCC
GGCGCCCAGC TACCCGGCGA ATCCATGCAA CGCTCGCAAG GCCCCGACGT CGAAACGCCG
AACGCCCAGG CGCCGGATCT CCGTACCGCC GACGTCGAGA CCGTGCGCAA GGACGTGTTC
GGCCTCGCGA CGAGCGGTGG CGCGGTCAAG GCGATCGATG AAGCGAAAAT GCGGCCCGAC
GCGTTCTCCG CCGTCGACAT CGCGCAACTG GAAGAACTGT CGATTCGCCA GCAGGTGCGC
GGCGGACGCG ACAAGTCGCG CGCGATGACG AGTTCGGACC GCTTCGACGG ACTCGACAAC
GCGCTGCGCG CGGCCGACGA CCTCGACCAG CGGATGCCGG CCACACCCGA GTACACGCCC
GTCAGGACGG CGCTCGCGGG CGACCGCACG GTCGCCCTTG CGGCACGCGG CGACATGACG
AAGGCCGTCA AGACGTTCGA GACCATCCCG CCCGACGCGG AGATCTCGAT CGACGCGCTG
GCGGCCGTCG GCGACGCGTA TCTTTACCTG AGCGAACCGG GCAAGGCGAA TGCCGTCTAC
CAGCGTGCGC TGAATCAGGC GACCGCGTCG CCGACGGACC GCGCGACGCG CGGCTTCCAG
TACGGTGCAC GCACGCGTGC GATCGAATTG CGCGAAGGGC TGTTCTGGTC GTACGTCGAC
CGGGCCCGCG CGGCGGACGC GAAGCAGGTG CTCGACGACA TGGGCAAGTC GCTGCCGCCG
GCCACGGAGG TGCGCAACTA CGGCCCGGGG GAAAGCGACT ATCTGCGCTA CTACCGGCTG
CGCGCGCAAT ACCTGATCTT CACGGGTCGG CCCGACGAAG GGATCGCCGC GCTCGAGCAA
CTCGAGAAGG AGGTCCCGTT CAACGGCGAG GTGCGCGCCG CGCACGCCGA TGCGGTGTCG
GGCCAGGCGC ATCCGCGCCA GGCGATCTCG ATGTATCGCG CGTCGCTGGC CGACCACCCG
GACAGCGTCG AGATGCTCGC GGGCCTGGGC CGCGCGTCGC TCACGGCGGA CGACTACGCG
ACCGCGAAGA GCGTCGACCA GACCCTGGAC AACACGTTCC CGGACAGCGG CGCCGTGCGC
AGCTTCAAGC GCGACTACAA GGCCTACCGC AGCCCGATAT TCACGACCGA CCTGAGCTTC
GAGCACGGCA ACAGCGCGCT GGCCGACAAC AGCTTCACGT CCGACAGCTA CATCTATTCG
CAACCGTTCG GCGACAACTG GCGGGTCTTC TCGCACACGT TCTTCGGCCA TGCGCAAACC
GACAGCGGCA GCATCAGCCG CACCCGCACG GGCATCGGCG GCGACTACCG GCACGGGCCG
CTCACAGTCC TCGGCGAAGT CACGCGTTCG CTCGGCGGGG ACGGCCGAAC CGGCGGCCGC
GGGACGATCG CGTACGCGCT GAACGACTAC TGGACCGTCT CCGGCGGGGT CGACAGCAAC
GACAACTCGC TGCCGTGGAA GGCGTATGCC GCGCACATCT GGGGCCGCTC CGCGAACGTG
TCGGTGGTGT ATCGCCAGAA CGACCGGCGC GAAGTCAAGC TGAGCTACGG CGTGAGCCGC
TACAGCGATT CGAACCTGCA CCAGGAAATC AACGCGACCG CCACGCAGCG CGTGTACACG
TCCGCCAACC AGCTCGTCAA CGTATCGCTG GATCTCGGCA CCGACAGCAA CACCCGCCGG
GACGCACCGT ACTTCAGCCC GGGCCGCGAC TACGCGGCCG CGGCGACCGT GATGCACCAG
CTGACGTTGT GGAAGAAGGG CGACATGGGG CTGCAGCAGC GCATCTCGGT GTCGGGCGGC
GCTTACAACG AGCGCGGATT CGGCACCAGC GCGCTGTGGA GCGCGCGGCT CGAGCACGCG
TGGACGTTCA AGCACGACAT CACGCTGAGC TACGGCGTCG AGGTCAGCAG CCACGCGTAC
GACGGCGAGC GCGAGCGCTC CGAAACCGGC TTCCTGTCGC TCAACCTGCC GTTCTAG
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| Protein sequence | MANNRKEQCT TVAPSNRRIL LHAPLLLLLV ASGPCFAAEG DAEPGSAREI AGTHGARDAL
PPDMQPTGTP MQAAQDSGTL PPHAPTPIAL ASDASLQMAQ ASPMPITVVV EPEAPQSGEP
APGAQPPDPP TPVAPTPDGP RQLAQVPDTA PANTAAPMAQ TQDAPMQLAQ TSDSAPPSTP
APVAQTQDAP MPPAQASDTT PPNTPAPIAQ TQDAPMQAAQ ASDTAPPNTP APVAQTPDAP
MPPAQASDSP PPNTPARIAQ TQDAPMPPAQ ATSSQPPDTP APTAATPSQP SASAAPAPAP
SAQPPDTAPQ PAQAATTTPP NSQTQTAQAS GTPMPNSPTP VTQMPGAQSP SSQGPSSQTP
GAQLPGESMQ RSQGPDVETP NAQAPDLRTA DVETVRKDVF GLATSGGAVK AIDEAKMRPD
AFSAVDIAQL EELSIRQQVR GGRDKSRAMT SSDRFDGLDN ALRAADDLDQ RMPATPEYTP
VRTALAGDRT VALAARGDMT KAVKTFETIP PDAEISIDAL AAVGDAYLYL SEPGKANAVY
QRALNQATAS PTDRATRGFQ YGARTRAIEL REGLFWSYVD RARAADAKQV LDDMGKSLPP
ATEVRNYGPG ESDYLRYYRL RAQYLIFTGR PDEGIAALEQ LEKEVPFNGE VRAAHADAVS
GQAHPRQAIS MYRASLADHP DSVEMLAGLG RASLTADDYA TAKSVDQTLD NTFPDSGAVR
SFKRDYKAYR SPIFTTDLSF EHGNSALADN SFTSDSYIYS QPFGDNWRVF SHTFFGHAQT
DSGSISRTRT GIGGDYRHGP LTVLGEVTRS LGGDGRTGGR GTIAYALNDY WTVSGGVDSN
DNSLPWKAYA AHIWGRSANV SVVYRQNDRR EVKLSYGVSR YSDSNLHQEI NATATQRVYT
SANQLVNVSL DLGTDSNTRR DAPYFSPGRD YAAAATVMHQ LTLWKKGDMG LQQRISVSGG
AYNERGFGTS ALWSARLEHA WTFKHDITLS YGVEVSSHAY DGERERSETG FLSLNLPF
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