| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3956 |
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| Symbol | |
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| ID | 6180632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 958688 |
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| End bp | 959761 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683726 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_001810637 |
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| Protein GI | 172062986 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.892783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.485051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG ACCTCTCCCG CTCGCCCGGC GGCCTGCACG CGGCGTTCGA CGCCGGCCCC
ACGCCGCACG CCGACGCTCC CGCGATGGTC CTGCTGGTCG ACGACCAGAC GATCGTCGCG
GAAGCCATCC GGCGCGCGCT CGTCGACGAG GACGGCATCG ACTTCCACTA CTGCCCGCGC
TCGGACGACG CGCTCGCGAC CGCGATCGAG ACGCGGCCGA CGGTGATCCT GCAGGATCTC
GTGATGCCCG GCACCGACGG GCTGACCCTC GTGAAGGCGT ACCGCGCGAA TCCGGCGATG
CGCGACGTGC CGATCATCGT GCTGTCGACG CAGGAAGAGC CGGTGGTGAA GAGCGCCGCG
TTCGCGGCCG GCGCGAACGA CTACCTCGTG AAACTGCCCG ACCGCATCGA GCTGGTCGCG
CGAATCCGCT ATCACTCGCG CTCGTACATG AGCCTGCTGC AACGCGACGA GGCCTATCGC
GCGCTGCGGC AATCGCAGCA GCAACTGCTC GAGGCCAATC TCGAACTGCG GCGCCTCACG
CATTCGGACG GCCTGACCGG GCTGTCGAAC CGGCGCTATC TCGACGAATA CCTGGCGGCC
GAATGGCGGC GCGGCGCGCG CGAGCGCAGC GAGCTGTCGC TGCTGATGAT CGACGTCGAC
AACTTCAAGC TGTACAACGA CACGTACGGC CACGTATCGG GCGACAGCGT GCTCAAGCAG
GTCGCGTCGA CCATCGAGCG CTGTCTCGGG CAGTCCGGCG ATCTCGCCGC GCGCTTCGGC
GGCGAGGAGT TCGCGGTCGT GATGCCGGCC ACGTCGCCGG GCGCCGCGCG GCTGCTCGGC
GAGAAGATCC GCCTCGCGAT CGAGTCGCTG CGGCTCGAGC ACGCGCACTC GTCGACGGGC
CGCTACGTGA CAATCAGCAT CGGCGGCGCG AGCATCGTGC CGGCCGCCGG CGTGCCGACG
ACGTCGCTGA TCGAGGCGGC CGATCGCGCG CTGTATCGCG CGAAGCACGA CGGCAAGAAT
CGCGTGGAGA TCGATGCGCC GCCCGCGCGT CCGCCCGGCG GCGGTTTCGC TTGA
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| Protein sequence | MTSDLSRSPG GLHAAFDAGP TPHADAPAMV LLVDDQTIVA EAIRRALVDE DGIDFHYCPR
SDDALATAIE TRPTVILQDL VMPGTDGLTL VKAYRANPAM RDVPIIVLST QEEPVVKSAA
FAAGANDYLV KLPDRIELVA RIRYHSRSYM SLLQRDEAYR ALRQSQQQLL EANLELRRLT
HSDGLTGLSN RRYLDEYLAA EWRRGARERS ELSLLMIDVD NFKLYNDTYG HVSGDSVLKQ
VASTIERCLG QSGDLAARFG GEEFAVVMPA TSPGAARLLG EKIRLAIESL RLEHAHSSTG
RYVTISIGGA SIVPAAGVPT TSLIEAADRA LYRAKHDGKN RVEIDAPPAR PPGGGFA
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