Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3946 |
Symbol | |
ID | 6179745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 947366 |
End bp | 948127 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641683717 |
Product | hypothetical protein |
Protein accession | YP_001810628 |
Protein GI | 172062977 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.359138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.604331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA TTCGAACGAT AGTGGCCCTG TGCTCGGTCA TTTCCGTACT CGCGGCATGC GGCGGCGGCG ACGACGTCGG CACCGAACTC GGCATTTCCA AACCGCAGGC CCGCTTCATC AACGCAGTGC CGGCCGGCCC GAATCTCGAC TACTACCTGA ACGCGAAAGT CGACGCGTCA GGCATCGCCT ACAAAGGCGT GACCCGCTAT CACGACATCG ACTCCGGCAC GCAGACCGCC AGCTACGACG TATCGGGAAC GACCACGACC GTCGCGTCGC AGTCGTTCAG CGCGGCGAAC GGTCATCACT ACACGACCAT TGCATTGCCG AGCAAGTCGT CGGCGATTTC GCTGATCGAC GACCCCTTCG ACAAGAAGCT GCTGTCCGAC AAGGCGCGCG TGCGTAGTTT CAATGCGTCG CCGAATGCCC AGAACGTCGA CGTCTACGTG GTCCCTCCGG GCACCGACAT CACGGGACAA AGCCCGACGC TGGCCGGTGC GGCCTACCAA AATGCGGTGC CGGCATCCGG ACAGGATTCC GTCTATCTTA ACGGCGGCAC CTACCAGGTG ATCGTCACGA CGGCAGGCAG CAAGACGCCG ATCCTGAAGA CCCCGCCGGT CGCGCTGAAC AACAACGCCG ACTGGCTGCT GTTGACGATT CCAGCCGGCG GCATTGACGA CGTGATACCG AACGACGTTC ACGTGCTCGT CGCGCAAGGC AACGATGCGG ACACGTCCGC ACAGGAACTC GGCCCGCAGT AA
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Protein sequence | MKSIRTIVAL CSVISVLAAC GGGDDVGTEL GISKPQARFI NAVPAGPNLD YYLNAKVDAS GIAYKGVTRY HDIDSGTQTA SYDVSGTTTT VASQSFSAAN GHHYTTIALP SKSSAISLID DPFDKKLLSD KARVRSFNAS PNAQNVDVYV VPPGTDITGQ SPTLAGAAYQ NAVPASGQDS VYLNGGTYQV IVTTAGSKTP ILKTPPVALN NNADWLLLTI PAGGIDDVIP NDVHVLVAQG NDADTSAQEL GPQ
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