Gene BamMC406_3946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3946 
Symbol 
ID6179745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp947366 
End bp948127 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content62% 
IMG OID641683717 
Producthypothetical protein 
Protein accessionYP_001810628 
Protein GI172062977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.359138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.604331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA TTCGAACGAT AGTGGCCCTG TGCTCGGTCA TTTCCGTACT CGCGGCATGC 
GGCGGCGGCG ACGACGTCGG CACCGAACTC GGCATTTCCA AACCGCAGGC CCGCTTCATC
AACGCAGTGC CGGCCGGCCC GAATCTCGAC TACTACCTGA ACGCGAAAGT CGACGCGTCA
GGCATCGCCT ACAAAGGCGT GACCCGCTAT CACGACATCG ACTCCGGCAC GCAGACCGCC
AGCTACGACG TATCGGGAAC GACCACGACC GTCGCGTCGC AGTCGTTCAG CGCGGCGAAC
GGTCATCACT ACACGACCAT TGCATTGCCG AGCAAGTCGT CGGCGATTTC GCTGATCGAC
GACCCCTTCG ACAAGAAGCT GCTGTCCGAC AAGGCGCGCG TGCGTAGTTT CAATGCGTCG
CCGAATGCCC AGAACGTCGA CGTCTACGTG GTCCCTCCGG GCACCGACAT CACGGGACAA
AGCCCGACGC TGGCCGGTGC GGCCTACCAA AATGCGGTGC CGGCATCCGG ACAGGATTCC
GTCTATCTTA ACGGCGGCAC CTACCAGGTG ATCGTCACGA CGGCAGGCAG CAAGACGCCG
ATCCTGAAGA CCCCGCCGGT CGCGCTGAAC AACAACGCCG ACTGGCTGCT GTTGACGATT
CCAGCCGGCG GCATTGACGA CGTGATACCG AACGACGTTC ACGTGCTCGT CGCGCAAGGC
AACGATGCGG ACACGTCCGC ACAGGAACTC GGCCCGCAGT AA
 
Protein sequence
MKSIRTIVAL CSVISVLAAC GGGDDVGTEL GISKPQARFI NAVPAGPNLD YYLNAKVDAS 
GIAYKGVTRY HDIDSGTQTA SYDVSGTTTT VASQSFSAAN GHHYTTIALP SKSSAISLID
DPFDKKLLSD KARVRSFNAS PNAQNVDVYV VPPGTDITGQ SPTLAGAAYQ NAVPASGQDS
VYLNGGTYQV IVTTAGSKTP ILKTPPVALN NNADWLLLTI PAGGIDDVIP NDVHVLVAQG
NDADTSAQEL GPQ