| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3943 |
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| Symbol | |
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| ID | 6180312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 944763 |
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| End bp | 945929 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641683714 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810625 |
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| Protein GI | 172062974 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.399731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.68595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGACG CACCGGAGCC GACCGGCCTG CCCGTCGACG CGTCCGACGC CACGGGCGCG
CTCGACGTAC TGGACGCGCG GCTGATGCGC ATCCTGCTCG TGCTGCTCAC CGAGCGCACC
GTGTCGCGCG CGGCCGTGCG GCTGAACATG TCGCAGCCGG CGACGAGCGC CGCGCTCAAG
CGGCTGCGCA CACTGCTCGG CGATCCGCTG CTGGTGCGCA GCCGCTACGG CATGGTGCCG
ACCGAGTTCG GCGCGCGGCT GATCGAGCCG CTGCGCAATG CGCTGCGCGT GATCGACTTC
ATCCGCATCC AGCAGCCGAC CTTCGACGCG CGCACCTCCG TGCGCACCTA CCGGATCGGC
TGCCCCGATT ACCTGAACGT GCTGTTCGTG CCGAAGCTCG TCGCGCTGTT CCGCGAATGC
GCGCCGAACG CGCAGCTCGT GTTCCATCCG CTCGGCGACG GTTTCGACGA CGAACGTGCG
CTCGCCGACG GCGAGCTCGA CGTCGTGATC GACAATCGCC CTGCCCGTTC GTCGCGGTTC
CGGCAGGACG ACCTGTTCGA CGATCGCGTC GTGTGCCTGA TGCGCGCGAC GCATCCGCTC
GCGCGGCGCG GCGCGATGAC GGCCGCCGAA TTCGCGCAGG CGGCGCAGCT GTGCCCGACG
CCGTCGTGGC TCGAAGCGTC CGGCGCGATC GACCTGCAGC TCGAACGCGT CGGCCTGCGG
CGGCGGATCG TCGTCACGCT CCCGCATTTC GAACTCGCCG CGCATGCGCT CGTGCGCTCC
GACCTGATCC TGACCACCAC GTATCGGCTC GCGCGCCACT ACGCGAAGCT GCTGCCGCTC
CGCGCGGTCG CGCTGCCGGC CGAGCCGCCC GACATCGTGT ACCGGATGAC GTGGAACGAG
TCGGGGCCGT GCGTCGACGG CGTGCGCTGG CTGCGCACTT TGATCGCGGA AGCGACGCGC
AGCTGGCTCG ACGCGGAAGC TGCGCTGCCG GATGTCACGG CGGTTGCCGC GAACGCGGAC
GCGCGAACGG CTGCGCCGGT GGCCGACGAA CCGCCCGAAC CCGCGCGACG CATCCGCCGG
CGGCAGGCGA CGCATTGCGG CACCTCGCAG CGGCAGCACC CCGCGCGCGC GGCGCGCATC
CATCGGAGCG CGACGAAGTC GCACTGA
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| Protein sequence | MRDAPEPTGL PVDASDATGA LDVLDARLMR ILLVLLTERT VSRAAVRLNM SQPATSAALK
RLRTLLGDPL LVRSRYGMVP TEFGARLIEP LRNALRVIDF IRIQQPTFDA RTSVRTYRIG
CPDYLNVLFV PKLVALFREC APNAQLVFHP LGDGFDDERA LADGELDVVI DNRPARSSRF
RQDDLFDDRV VCLMRATHPL ARRGAMTAAE FAQAAQLCPT PSWLEASGAI DLQLERVGLR
RRIVVTLPHF ELAAHALVRS DLILTTTYRL ARHYAKLLPL RAVALPAEPP DIVYRMTWNE
SGPCVDGVRW LRTLIAEATR SWLDAEAALP DVTAVAANAD ARTAAPVADE PPEPARRIRR
RQATHCGTSQ RQHPARAARI HRSATKSH
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