| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3941 |
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| Symbol | |
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| ID | 6180638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 942086 |
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| End bp | 942964 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683712 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001810623 |
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| Protein GI | 172062972 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.469877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGC TCGAATTCCG TCATGTGCGC GCGTTCCTGA GCGTCGCGCA GCATCTGCAT
TTCGCTCGCG CGGCCGACGC GCTCGACATG GCGCCGCCCG CGCTCACGCG GCAGATCCAG
GAGGCCGAGC GACTGCTCGG CGTGCGGCTG TTCCAGCGCT CGCGCCGTGC GGTCACGCTG
ACGGCGGCAG GCGTTGCGTT TCTCGCCGAG GCGAGCGCCG CGTTCGAGCA TCTGCAGCGC
GGCCGCGAAC TCGCGATGCT GGCCGAGCGC GGCGAACTCG GCCGTATCGA AATCGGCTAT
GTGTCGTCGG CTGTCTATTC GGGCGCGCTG CAGCGTACGG TCGGCGCGTT TCGCGCCGCG
CATCCGCGCA TCGAACTGAA TCTCCGGGAA GTGCCGATGG ACGACGTCGC GAAGCAGCTC
GACACGGGCC GGCTCGATCT CGCATATGTG CGGCCGCCAT TACCGCTGCC GGGCGCGCTG
CGGATCGTCA CGCTGCAGCG CGACGTGTTC GTCGCGGCCG TGCCGGCCGA TTCACGCTAC
GCGTCGATGA CCACCGTACG CGCCGCCGAT CTCGCCGACG CATGCTTCGC GGTGCCCGAG
CAGGAGCGCG GCACGCTCGA AGTCGCACGC CGCGGCCGCT TCGCGCCCGT GATCGCCGCG
CGGCCGGGCG GCTTGCTCGC GGTGCTCGCG TGCGTGTCGG TCAACGGCTG GGTCGCCGTG
ATTCCGGACG CGCTCGCCGG CTGCGTGTCG TTGCCGGGCG TCGTGTACCG GCCGATCGCC
GGCAAGCCGA TCACGTCCGA ACTCGCGCTC GCGCACCGGC GCTTCGAGAA GGCGCCCGCG
GTACGTGCGT TCCTGCGCAC CGTCCCTGCG GCAGGCTAG
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| Protein sequence | MNQLEFRHVR AFLSVAQHLH FARAADALDM APPALTRQIQ EAERLLGVRL FQRSRRAVTL
TAAGVAFLAE ASAAFEHLQR GRELAMLAER GELGRIEIGY VSSAVYSGAL QRTVGAFRAA
HPRIELNLRE VPMDDVAKQL DTGRLDLAYV RPPLPLPGAL RIVTLQRDVF VAAVPADSRY
ASMTTVRAAD LADACFAVPE QERGTLEVAR RGRFAPVIAA RPGGLLAVLA CVSVNGWVAV
IPDALAGCVS LPGVVYRPIA GKPITSELAL AHRRFEKAPA VRAFLRTVPA AG
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