| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3937 |
|---|
| Symbol | |
|---|
| ID | 6181190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 937918 |
|---|
| End bp | 939093 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641683708 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001810619 |
|---|
| Protein GI | 172062968 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.354956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.157719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGTGT TCTACGCGCT GTTTATCGCG GTCTGGACGA CCGTCGTGCG CCACGGCGGG
GCCGTGGGCC GCCCCGGCGC CGACTTCTCG GTGTTCTGGT CCGCGTCGTA CGTGATGCTG
CACGGTACGC CTGCGCAGGC GTACGATTTC TCGTCATTCT CGCGGCTGAC GACCGAGCTG
TTCACCCACT TTCGTCGTGA CAGCTTCGCG CCGTGGCTGT ACCCGCCCAC CTATCTGCTG
CTCGTGACGC CGCTGGCGCT GCTGCCCTTT GCGCTCGGCT ATCCGCTGTT CGTCGCGTTC
GGCGTGGTCG TGCTCGGCCT CGCGGCATCG CGCGTATCCG GCCTCGGCAC GATGGCCGGC
GCAGGGCGCG CCGCGACGCT CGCGCTGGGC GCCGCACCGT GCGTGTTCGT CACCGCGACG
CTCGGGCAGA ACGCGTTCCT GACCGCCTCC TGCGCGGCGC TGGCCGTCCA CTGGGCCGCC
CGGCGGCCGA TGTGGGCCGG CCTCTGCATC GGCCTGCTGT CGGTCAAGCC GCAGATGGCG
TTGCTGTTCC CGTTCGTGCT GATCGCGGCG CGCGCGTGGC GCACGATCGC ATGGGCCGCG
CTCGCCACTG GCACGTTCGT CGCGCTGAGC GTCCTGGTCT GCGGGGTCGA CTCGCTGCGC
CTGTTCGTCG CCAGCACGGG CCTCGCGCGC TCGATCGTCC TCGAACACGG TGTCGTGTTC
TGGCTCGTGT CGCCCACGCC GTTCGCGACG TTCCGCCTCG CGGGCGTGCC GCTCGCCGTC
GCCTATGCCG CACACGCGTG TATCGCCGTG ATCGCGATCG CGGCCGCCTG CACCGCATGG
GCACGGTCAC GCGATACCCG CGTGCGCGCG GCCGTGCTGA CGGTCGCGAC GCTCGCGGCG
AACCCGTACG TTTGGCACTA CGAACTCGCG TGGCTCGCCG TCGCGATCGC CTGCATGCTG
GCGATCGGCT GGCGCGACGG CTGGCTGCGT GGCGAACAGA CGGCGATCGC GCTGCTGTGG
GCGCTGCCGA TCTGCGAATA CCTGAACCCG TGGCTCGAGT GGCCGCAGAT CGGCCCGGCC
GTGACCCTCT TCGCGCTGCT CGTGCTGCTG CGGCGCGCGC GGCACGACGC CCACCACGCT
CACAACGCGA GCCGCGGCGG CACGTACACG CCGTAG
|
|---|
| Protein sequence | MLVFYALFIA VWTTVVRHGG AVGRPGADFS VFWSASYVML HGTPAQAYDF SSFSRLTTEL
FTHFRRDSFA PWLYPPTYLL LVTPLALLPF ALGYPLFVAF GVVVLGLAAS RVSGLGTMAG
AGRAATLALG AAPCVFVTAT LGQNAFLTAS CAALAVHWAA RRPMWAGLCI GLLSVKPQMA
LLFPFVLIAA RAWRTIAWAA LATGTFVALS VLVCGVDSLR LFVASTGLAR SIVLEHGVVF
WLVSPTPFAT FRLAGVPLAV AYAAHACIAV IAIAAACTAW ARSRDTRVRA AVLTVATLAA
NPYVWHYELA WLAVAIACML AIGWRDGWLR GEQTAIALLW ALPICEYLNP WLEWPQIGPA
VTLFALLVLL RRARHDAHHA HNASRGGTYT P
|
|---|
| |