| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3906 |
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| Symbol | |
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| ID | 6180606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 909267 |
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| End bp | 910028 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641683678 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001810589 |
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| Protein GI | 172062938 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.476334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAC GCAATCGAGA AACCGGAGCC TTCGCAGGCA AAGTCGCTAT CGTTACCGGC
GCGGCCAGCG GCATTGGCCT GGCGACTACG GAACTGCTCC ATGCCGAGGG TGCAAACGTA
ATCGCGGTTG GTCGCAGCGC CAATGTCGAG GCGCTCGCCC GCCCCGGCAT CGTGCCCCTC
ATCGCCGACG TTGCGCGGGA AGAAAGCGCC GTGCAGGCCG TCGCAGCTGC GGTGGATAAA
TTCGGCAAGC TCGACATCCT CGTCAACAAT GCCGCGATCA TCATCAACAA GCCCGTCGTT
GAAATGTCGC TTGAAGACTG GAACAGCATC CAGTCAGTCA ACGCCACAGG TGCGTTTCTG
TTCTCACGGG AAGCCATGCG CGTGATGGTG CCGGCAAAGA CCGGCGCCAT CGTCAACGTG
GGTTCGTACG CGTGCTATCA GGCTTTCCCG ACGATCGCAG CCTATGCGGC CTCGAAGGGG
GCGCTGGCGC AGTTGACGCG CGCCTTGTCG CTGGAAGCCA TCGAGCATGG CATTCGCGTC
AATGCGGTCG GCTCGGGCGA CGTCATCACC AACATCACCA ATCACATCCA CGCTGACGGT
CAAGCATTCC TGGCCGAGCA CGGCAAAAAG GCGCCGATCC GCCGCGCGGC CCAGCCGAAA
GAAATTGCAG AGGTGATTGC CTTCCTGGCA TCGGAAAAGG CCAGCTTCAT GGTTGGCGCC
GTGGTGATGG CCGATGGCGG CATGAGCGTC GCACTCCCGT AA
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| Protein sequence | MTSRNRETGA FAGKVAIVTG AASGIGLATT ELLHAEGANV IAVGRSANVE ALARPGIVPL
IADVAREESA VQAVAAAVDK FGKLDILVNN AAIIINKPVV EMSLEDWNSI QSVNATGAFL
FSREAMRVMV PAKTGAIVNV GSYACYQAFP TIAAYAASKG ALAQLTRALS LEAIEHGIRV
NAVGSGDVIT NITNHIHADG QAFLAEHGKK APIRRAAQPK EIAEVIAFLA SEKASFMVGA
VVMADGGMSV ALP
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