| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3899 |
|---|
| Symbol | |
|---|
| ID | 6180210 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 901792 |
|---|
| End bp | 902610 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641683671 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001810582 |
|---|
| Protein GI | 172062931 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.447694 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTACGAA GCACCAAGGC ATTACACGGA AGTGCGGTGC GTGCAAAGGA CGGAGACATC
GGACACGTCA ATCAAGCCTA CTTCGACAAC GACTGGTGCA TCCGTTACCT CGTCGTCAAG
ACGGAGGACT GGCTGCACGA GAGGCAGGTG CTCATCTCGC CCTACTGCAT CAAGCACACC
GACTCCCGGT CCAGCACGCT GCATGTCGAC CTCACGCGCA AGCAAGTGGG AGACAGCCCG
GCTCTGGACA CACACCAACC CGTATCCCGC CAACACGAGA TCGAATACCT GAGCTACTAC
CATTATCCGC GCTACTGGGA TGGCCCGAAC CGGTGGGGCA TGGACGCATA CCCTACGTCC
GGTTCTGCCA CCCTGTCGCG AGAACTCGAG GCCGGAAATC CGCTCCCCTC CCTCACAATG
CCCCGCGATG TGCCGGCCGA TGCGCCGACG GATACGCATC TGCACGGCAC CAGCAGAGTC
AAGGGCTATC GGCTCGAAGC CACGGCCGGA CGCATCGGCC ACGTGTCTGA CTTCGTCTAC
GACGATGAAG CCTGGGTGAT CCGCTATCTC GCAATCAGTA CGCGGAACTG GTGGTTGACC
AACAAGGAAA TTCTGATCGC GACGCACTGG CTCGACCGGG TGAACTGGGC CACGGAAACG
GTATCAACCG CGCTCAACCG CGACTCGATT CGCCACAGTC CCGAATACGA CGATTCACAG
CCCGTCTACC GAAGCGACGA GATTGCGTTG TATCAGTTTT ACGGCAAGCA TGGCTACTGG
CTGAATGCCG AATCATCCTC GGCCCGCGGG ACGCTTTGA
|
|---|
| Protein sequence | MLRSTKALHG SAVRAKDGDI GHVNQAYFDN DWCIRYLVVK TEDWLHERQV LISPYCIKHT
DSRSSTLHVD LTRKQVGDSP ALDTHQPVSR QHEIEYLSYY HYPRYWDGPN RWGMDAYPTS
GSATLSRELE AGNPLPSLTM PRDVPADAPT DTHLHGTSRV KGYRLEATAG RIGHVSDFVY
DDEAWVIRYL AISTRNWWLT NKEILIATHW LDRVNWATET VSTALNRDSI RHSPEYDDSQ
PVYRSDEIAL YQFYGKHGYW LNAESSSARG TL
|
|---|
| |