Gene BamMC406_3878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3878 
Symbol 
ID6181019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp874298 
End bp874888 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content63% 
IMG OID641683649 
Productmolybdopterin oxidoreductase Fe4S4 region 
Protein accessionYP_001810561 
Protein GI172062910 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.297199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACAAA TGTCACGGCG CCAGTTCCTG AAGGTGACGG CCACGTCGCT TGCCGGTTCG 
AGTCTTGCCC TGCTGGGCTT TTCTCCGACC GAGGCGCTTG CCGAAGTCCG ACAGTACAAG
CTGGCGCGCA CCGTCGAAAC CCGCAACACC TGTCCTTATT GTTCAGTGGG TTGCGGCATC
CTGATGTACA GCCTCGGTGA CGGCGCGAAG AACGCGCAGC CGAGCATCAT CCATATCGAA
GGCGATCCCG ACCATCCCGT CAACCGCGGC ACGCTATGCC CGAAGGGTGC GAGCCTGATC
GATTTTATCC ACAGCCCGAG CCGCCTGACG CATCCCGAAT ACCGGGCGCC GGGCTCGGAC
AAGTGGGAGC GCATTTCGTG GGGCGATGCG CTCGACCGGA TCGCGAAGCT GATGAAGGCC
GATCGCGACG CGAACTTCGT CGAGACGGCG GAAGACGGCG CAAAGGTCAA CCGCTGGCTG
ACCACCGGCA TGCTGGCCGC GTCGGCGGGC AGCAACGAAG TCGGTTACCT GACGCACAAG
GCTGTCCGCA GCCTCGGGAT GCTCGTATTC GACAATCAGG CGCGTGTCTG A
 
Protein sequence
MLQMSRRQFL KVTATSLAGS SLALLGFSPT EALAEVRQYK LARTVETRNT CPYCSVGCGI 
LMYSLGDGAK NAQPSIIHIE GDPDHPVNRG TLCPKGASLI DFIHSPSRLT HPEYRAPGSD
KWERISWGDA LDRIAKLMKA DRDANFVETA EDGAKVNRWL TTGMLAASAG SNEVGYLTHK
AVRSLGMLVF DNQARV