Gene BamMC406_3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3838 
Symbol 
ID6180446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp829941 
End bp830405 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content65% 
IMG OID641683609 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001810521 
Protein GI172062870 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.277809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.961023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA AGAAGATGCA GCTCGACAAG ATCGATCTCC GGATCCTCGA CATCCTGCGT 
ACCGACGGAC GAATTTCGTA CCGCAAGCTG TCGGAGCTCG TGAACCTCAC GCCGCGCCCG
TGCCAGGCGC GCGTGGAGCG GCTCGAGGCG CTCGGCGTGA TCGAAGGCTA CCGCGCGGTG
ATCAAGGCGC CGCGCGCGAC CAAGCCGATC GTCGTGATCG CGCAGATCGT GCTGGCCGAT
CACGGGCGTT CGCAGGCGCC GTTCGAGGAG GAAATGCGGA CCAATCCGGC CGTGCTCGAC
TGCTGGCTCG TCAGCGGCAC GTTCGATTTT CTCGTGCGGC TCGCGTGCGA GGATCTCGAC
GAATACCGGC GGATCGCGAA CGTGTGGCTG GAAAGCCAGC GGTTCCGGAT CGAGAAGATC
GTGACGACCG CCGAGCTGCA GGCGATCAAG CGCAGCATCG TCTGA
 
Protein sequence
MTDKKMQLDK IDLRILDILR TDGRISYRKL SELVNLTPRP CQARVERLEA LGVIEGYRAV 
IKAPRATKPI VVIAQIVLAD HGRSQAPFEE EMRTNPAVLD CWLVSGTFDF LVRLACEDLD
EYRRIANVWL ESQRFRIEKI VTTAELQAIK RSIV