Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3771 |
Symbol | |
ID | 6179557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 743319 |
End bp | 744194 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641683541 |
Product | carboxymethylenebutenolidase |
Protein accession | YP_001810454 |
Protein GI | 172062803 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0116114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAC CCGAAGTCGA CAGCCTGGTT CCCCACGTTC CGTTCTCGCG CCGCAAGTTC ATGCAGGCCG CGCTGGGCGG CACTTTCGCG GCGGCCGTGC TGCCCGTGTC GGCGCAGACC ATCACGACCG ACAGCGCCGG GCTGGACGTC GACACCATCG AGATCCGCTC GGGCGACGCG AGCATCCCCG CGTATCGCGC GCAGCCGGTC GACAAGACGA ACCTGCCGGT CATCATCGTG ATCCACGAGA TCTTTGGCGT GCACGAGCAT ATCGCCGACG TCTGCCGTCG CTTCGCGAAA CTCGGCTATC TCGCGATCGC GCCGGACCTG TTCGCGCGCC AGGGCAATGC GTCGAAGTAC CCGACGATCC AGGCGCTCGT CGACAACATC GTCAGCAAGG TGCCGGACCG CCAGGTCACC GAGGATCTCG ATGCGACCGT CGCGTGGGCC GGCAAGAACG GCGGCGACCT GTCGCGTCTC GGTGTGACGG GGTTTTGCTG GGGCGGTCGT CAGGCGTGGC TGTATGTGGA GCACAATCCG CACGTGCGTG CGGCCGTGGC GTGGTATGGA TTCGTCGAGG GCAAGACCGA CGAGATGACG CCGTTCAATC CGGTCGATCA TGCGGCCTTG CTGAAGGTGC CGGTGCTCGG GCTGTACGGC GAGAAGGATG CGAACATCAC GCAGGCGTCG CTGGCCGACA TGCGCAAGGC GATCCAGGCG AGCGACTCGA AGCTCGCGCG CCAATCCGAG ATCGTCGTGT ATCCGGATGC CGGTCACGCA TTCTTCGCGG ATTACCGGCC GAGTTACGTG AAGGGCGATG CCGAGGACGG CTGGAAGCGC GCGATCGAGT GGTTCCACAA GTACGGCGTG ATGTAA
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Protein sequence | MLKPEVDSLV PHVPFSRRKF MQAALGGTFA AAVLPVSAQT ITTDSAGLDV DTIEIRSGDA SIPAYRAQPV DKTNLPVIIV IHEIFGVHEH IADVCRRFAK LGYLAIAPDL FARQGNASKY PTIQALVDNI VSKVPDRQVT EDLDATVAWA GKNGGDLSRL GVTGFCWGGR QAWLYVEHNP HVRAAVAWYG FVEGKTDEMT PFNPVDHAAL LKVPVLGLYG EKDANITQAS LADMRKAIQA SDSKLARQSE IVVYPDAGHA FFADYRPSYV KGDAEDGWKR AIEWFHKYGV M
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